KEGG   Salmo salar (Atlantic salmon): 106572432
Entry
106572432         CDS       T04363                                 
Name
(RefSeq) lysine-specific demethylase 5C-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sasa01009]
    106572432
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106572432
Enzymes [BR:sasa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106572432
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106572432
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106572432
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD
Other DBs
NCBI-GeneID: 106572432
NCBI-ProteinID: XP_014002084
UniProt: A0A1S3MG85
LinkDB
Position
ssa15:complement(81972003..81992772)
AA seq 1605 aa
MMAMEGEDFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE
VDSFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLSKVV
IEEGGFDIVGKERRWARVAQKLGYPTGRNIGSLLRSHYERIVYPFEVFHAGASLPQTKPK
LYDGEEVDREYKPHSIPLRQSVQPSKMSSYGRRANRLQPDGPEDSASHPLTTGSQHISAS
PDPTEEDIEKNPELKKLQIYGAGPKMMGLGLVPRNKSIPKKEELPQTVTVRDAAAAVQDK
EEPGEVKEGDSSTATPTPPPPPDVTVKNKVKKEDDDGGDRHDEKDQDDPNGDGPCTKMTM
RLRRNLSNPQFVDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLTEAPKGNWRCPK
CVAEECKRPAEAFGFEQATREYTLQSFGEMADTYKADYFNMPVHMVPTELVEKEFWRLVS
SIEEDVTVEYGADIHSKEFGSGFPMNNGKKNLSQEEADYARSGWNLNVMPVLEQSVLCHI
NADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAERLEEVMK
KLTPELFESQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYN
FAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATHREM
FIIVQEERKLRKGLLERGITEAEREAFELLPDDERQCDNCKTTCFLSALACSNCPERLVC
LYHTQDLCSCPTDKLYLRYRYTLDELFAMLHRLKVRAEVFDSWANRVKEALEQEEGNKIG
ITDLEVLKAEAAEKKFPDNELLQRLNTVLTDTQNCQQTSTELLNKTQTRRMTLAELKALV
EKMENLPCVMSQLEDVQAVLRTIEEFQTQSRALVTHRDWRRDSAPPEQLQALLEQGAGLP
VDAPECELLKGLQEQGRWLGEVRQTLGPEGGVMTLAVLRNLMEVGCNVPQSVSVETAMAE
LQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILSLQGCLSRAKAW
VNDLEEIQNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWRDKASKTFLKK
SSQHSLLQVLCPCVEKRKERGEETDPLDDPDTNTLGLSAQDLRDPGAIVTAFKEGEHQEK
EALLRLQKVNLSKPGVEKKAEKEIKTEREDKENGGGRWGEDPMELDTALHSENCGKGNGG
SNHTTTGSSTPPQSVCVCGRAPRPPLLRCHLCKDWFHGGCVPFPSLLPSSSGLPTNPLCW
WDWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEA
LDTPEIQRALERLQELKQNQPHREGEEEEDGKKGNCESVIVLSDSEGGEGDGVIDLTEEN
SPKKTVKKEMNGGMQAGCENGVSKKVKPHHNVTGVGSLLPLVPSLKGPVIELSLTTRTQL
EELQLEGDLLEVSLDQTSTIHRVLQAALEPHRHTLRTLILIELQEQKGVGRGGRAKDSKR
KRKSQRGVTGVEGTPRSQDASECKKTCPLNHTPPHIPIQTHPEIL
NT seq 4818 nt   +upstreamnt  +downstreamnt
atgatggcgatggagggggaagactttgtgccgcctcctgagtgcccagtgttcgagccg
tcatgggaggagtttcaggatcccctgggctatattgccaagatccgtccaattgcagag
aagtctggaatctgcaagattcgtcctcctgctgactggcagccaccctttgctgtggag
gtggatagcttccgcttcacaccccgtatacagagactcaatgagctagaggcggagacc
cgagtcaagctgaactacttggaccggattgccaagttctgggagatccagggatcctcc
ctcaagatcccaaacatcgagaggcgtatcttggaccttttcagcctgtccaaggttgtg
atagaggagggagggtttgatatagtcggtaaggagcggcgttgggctcgtgtggcccag
aagcttggctacccaactggcaggaacattggctccctcctgcgctcacactacgagagg
attgtctacccctttgaggtgtttcatgctggggccagcctgccgcagactaagccaaag
ctatatgatggagaagaggtggatagagaatacaagccccactccatccccctacgccag
tctgtccagccttccaagatgagcagctacggacgccgagccaatcgccttcagccagac
ggtccagaggattctgcctcccaccctctcactactggctctcaacacatctctgcatcg
cctgaccccacggaggaggacatagagaagaaccctgagctgaagaaactacagatctac
ggggcaggacctaagatgatggggctaggactggttcccaggaataagagcatccccaag
aaagaagagctgcctcagactgtgactgtccgtgatgcagctgctgctgtccaggacaag
gaggaaccaggcgaggtcaaagagggagactccagcacagccacccccacgccaccgcct
cctcctgatgtcacggtcaagaataaagtgaagaaagaggacgatgatggtggagacaga
catgatgaaaaggaccaagacgaccctaacggtgatgggccctgcaccaagatgaccatg
aggttgagacgtaacctcagcaacccccagtttgtggattcgtttgtgtgtcggatgtgt
ggccgtggcgacgaggatgagaagctcctgctgtgtgacggttgtgacgacaactaccac
accttctgtctgctgccccccctcactgaagcccccaagggcaactggcgctgccccaaa
tgtgtggctgaggagtgtaaaagaccagcggaggccttcggttttgagcaggctaccaga
gagtacaccctgcagagttttggggagatggccgacacatacaaagcagactacttcaat
atgcctgtccatatggttcctacagagctggtggagaaagagttctggcgcttggtcagt
agcatagaggaggatgtgacagtggagtatggcgctgacatccactctaaagagtttggc
agtggattccccatgaacaatggcaagaagaacctctcacaagaggaagcggattatgcc
cgcagcggctggaacctgaatgtgatgccggtgctggagcagtcggtgctgtgccacatc
aacgccgatatctctggtatgaaggtgccctggctgtacgtgggcatggtcttctcagcc
ttctgctggcacatcgaagaccactggagctactccatcaactacctacactggggtgag
cctaagacgtggtacggggttccctctgtagcagcagaacggttagaggaggtgatgaag
aagctgaccccagagctgtttgagtcccagcctgacctcctccaccagctggttactatt
atgaaccccaacatcctcatgtctcacggggtcccggttgtacgcaccaaccagtgtgct
ggcgagtttgtcatcacgtttcccagggcttaccacagcggcttcaatcagggatataat
tttgctgaagccgttaacttctgcactgcagactggctgcctgcagggcgctcctgtatc
gagcactaccgtcgtctgcggcggtactgtgttttctctcacgaggagctgacctgtaag
atggccgcctgccctgagaagctggacctcaacctggccgctgccactcacagagagatg
ttcatcatcgtccaggaggagaggaagctacggaaaggcctgctggagaggggcatcaca
gaggcagagagggaggcattcgagctgctgcctgatgacgagaggcagtgtgataattgc
aagacgacctgcttcctgtctgccctggcctgttccaactgccctgaacgcctcgtctgt
ctctaccacacacaggacctctgtagctgccccacagacaagctctacctcaggtacagg
tacactctggatgagctgtttgccatgttacatcggctcaaagtgcgagccgaggtgttt
gattcctgggccaacagagtgaaagaggctctggagcaggaagagggcaacaagataggc
atcacagacctggaggtcctgaaggcagaggcagcagagaagaagttccctgacaacgag
ctgctccaaagactcaacactgtcctcactgacactcagaactgtcagcagacaagcact
gaactcctcaacaagacacagaccaggaggatgacgctggcagagctgaaggctctagtg
gagaagatggagaacctgccctgtgtgatgagccagctggaggacgtacaggcggtcctg
cgtacaatagaagagttccagactcagtcccgggctctagtgacccacagggactggcgg
cgagactccgctcccccagaacaactgcaggccctgttggagcagggagctggcctgccg
gtcgatgccccagagtgtgagctcctcaaggggctgcaggagcagggccgctggctgggc
gaggtgcggcagaccctggggcccgagggcggggtgatgaccctggcggtcctcaggaac
ttgatggaggtgggctgcaatgtgccccagagcgtctcagtggaaacagccatggcagag
cttcaggagctcctgactatagcagaacgatgggaggagaaggcccagatctgtctggag
caacggcagaagcaccctctgtccaccctggaggccatagtaaacgaggcccagctcatc
ccagtcaagctgcccaacatcctgtctctccagggctgtctgagccgagccaaggcctgg
gtcaatgacctggaggagatccagaatggggagcactacccgtgtctggatgatctggag
ggcctagtggcgatagggagagacctccctgtcaggatggaggagctgaggcagctggag
ctgcaggtagccagcgcccactcctggagagacaaggcctccaagaccttcctgaagaag
agcagccagcacagcctgctacaggtgttgtgtccgtgtgtggagaaacgtaaggagagg
ggagaagagacggatccattagatgacccagataccaacactctgggcctctctgctcag
gacctgagagaccctggcgccattgtgacggcgtttaaagagggagagcaccaggagaaa
gaggctctgctgaggctccagaaggtcaacctgtctaaaccaggtgtggagaagaaggct
gagaaagagatcaagacagagcgggaggacaaggagaatggaggtgggaggtggggggag
gaccccatggagctagacacagccctccactctgagaactgtggaaaggggaacgggggc
agtaaccacacgacgacaggcagcagcactcctcctcagtctgtgtgtgtgtgtggccgg
gcgccacgcccccctctgctgcgctgtcacctgtgtaaagactggttccacggtgggtgt
gtcccgttcccctccctcctgccttcctcctcagggctccccaccaaccccctctgctgg
tgggactgggactcacgcttcctgtgcccgcggtgccagcgctcacggcgcccgcgtctg
gagaccatcctggccctgctggtggcgctccagaggctgcccgtccgtctgccagaggga
gaggctctgcagtgtctcacagagagggccatcacctggcaggggcgtgccaaggaggca
ctggacacccctgagatacagagggcactagagaggctgcaggagctcaaacagaaccag
cctcacagggagggagaggaggaagaggacgggaagaaagggaactgtgagtcggtgata
gtgctatcagattcagagggaggagaaggagatggagtgatagacctcacagaggagaac
tctcccaagaagaccgtaaagaaagagatgaatggcggcatgcaggctggatgtgaaaac
ggcgtaagcaagaaagtaaagcctcaccacaatgttacaggtgtgggctctctgctgccg
ctggtcccatcactaaaaggcccggtgatagagctgtccctgaccaccaggacccagcta
gaggagttacagctagagggagacctgctggaggtgtctctggaccagaccagcaccatc
cacagagtcctgcaggctgctttagagccacacagacacacactcagaacactcatactg
attgagctccaggagcagaagggagtgggccgtggggggcgggctaaagactccaagagg
aagaggaaaagccagaggggcgtcacaggggtggagggaacaccccggtcccaggacgcc
tctgagtgcaagaagacctgtcccctcaaccacacaccccctcacatacccatccagaca
caccccgagatcttgtga

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