Salmo salar (Atlantic salmon): 106572468
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Entry
106572468 CDS
T04363
Name
(RefSeq) protein SOGA1-like
KO
K27704
microtubule cross-linking factor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106572468
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106572468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
bZIP_1
Motif
Other DBs
NCBI-GeneID:
106572468
NCBI-ProteinID:
XP_014002154
UniProt:
A0A1S3MGF5
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Position
ssa15:complement(82643630..82653957)
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AA seq
1338 aa
AA seq
DB search
MNSRDVDSPVPRQAHRGQRQPKAQQGVSMKKKRTPSNAPPKHAPSSSRSTWTVRRIMGKG
KEIKLEKGKRTGRCAPSVTECQKNLSTPRKRYDASNASEDLSNDSGCVSGKLSYSDRSSD
ISDCMEGFLTALGGNQLSADTPSPSCETGPSGGEREANRDRSRGNAHISVRDMSTGGSAF
KRLGLSQDNSIMHSVGDGNHSPGCGGSVLASLPSLNVSGASMVYSELTRELVDETHEDLV
RENDDLRSENEYLKDEMEEMRCEMLEMRDLFLEDELCQLQELRLQLEQANKLCRILQYRL
RKAERRSLRVAQTGQVEGELVRSLEHDVKVAKTVSLRLHNELESVQQKTSRLEWENEALR
ERQQELEVAKQVQQDAMEKARESSLKRKNVRSPTSKTEKKLSPQDDSADLKCQLHFAKEE
SALMCKKLTKMVSESEYMHEVLSKYRSAYGDVDAAAHSSEGGTAKSPHTREAEVKVHLRL
VEEEAMLLSRRIVELEVENHGLRAEMSDMRESVIGGGGEEEEEQPQKGARDNGDLPLLYV
RDVEDCEQSLRMECMQFEQEKGEEQRRSVIECSQEEVMEIHRRDQPQTERLSPLSQIPRE
GSVGGEWEPLDNQQCYTHRGSVAHALNVKDHEALLALRDHACLVTSAIQLFVSPAKNGHS
SPPLSPHISRAKSYPQGKAQPLALDPLMQGHLYEALELLQAMLLALMGRVELLVTQGGEL
RVEGNWDPTAIPSLADQDTQNNTEVSAKKETGEGLRTAVVKERVRRATQSDHLDSCRDPM
MKLTLKVLWVLHQRSVRKRSGLEGKESRDLMTMSILHGLLQYLGTELQDSEDSMAGQDAK
ATWASDWKGLVSKMECSMGKTEAQEYPDQPGHARGTQSEITETRNKTKPDRSTLGSKKKN
WCYLSQEAAQLDREDPFKTWDHPIMPPSFPNLNLDQLTLDSSRTAPEKTVLRIYYSPPSA
RRVHLAHLRHITNTDRNSTTSVISARLSTSQSSLTPLCLRLSANLSDDMKEMTASLRQAV
HSSSPERRKGRVIVSGGWTVDVATTGTQTQMYPQMVSVGLQMDGPDSVTAVRGNPLRLSA
RSQQISTSLERLPGRTKRSKSGSTSPKMYRRYSASASSSSSISPSSTTGFTTTSNSSTSS
SATPGREGVLWSLSHRGPAGPTWARPINPRAGPGLIHHSTINSELSSGGNNTKPTRKPGG
ANRYGLVTEFLRKMSGRADKPAQATAPGGGQKGKCSPTHKTLEVVPTRPPAAPVDRNDSI
ARIRNQRFMKQREEACRGQKEDNCPSQAHSQKQAFRRDMSLESNVTLEDGNYDCSSSKSL
SFCFARSSRLGPDQATAK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagagatgttgacagtccggtgccaagacaggcgcacaggggacaaagacag
cccaaggcgcaacagggtgtcagcatgaagaaaaagcgaaccccatcgaatgcgccgccc
aaacatgccccaagctcatccaggtcaacatggactgtccggcgcatcatgggcaaaggg
aaagagattaaactggagaaagggaagcgcacaggaaggtgcgcaccatccgttaccgag
tgccaaaaaaatctaagcacaccgagaaaacgatatgatgcaagcaatgcttcggaggat
ttgagcaatgattcaggttgtgtgtcagggaagctatcctactcggacagaagttctgac
atttctgactgcatggagggatttctgactgcattggggggaaaccaactttctgcggac
actccgtctccaagctgcgagactggaccaagtggtggagaaagagaggcaaacagagac
aggtcgcgtgggaatgcacacatcagtgtacgtgatatgagtactggaggcagcgcattc
aaacggctaggcctatcacaggacaattctatcatgcattctgtcggggatggaaaccat
tctcctggatgcggagggtccgttcttgcttcccttccctcgctgaatgtcagcggagca
tccatggtttattcagaactgacccgggagctcgtggacgagacgcacgaggatcttgtc
agagaaaacgacgatttgagatcggaaaatgagtatttgaaagatgagatggaggagatg
cgctgtgagatgctggagatgcgggatctgttcctggaggatgagttgtgtcagcttcag
gagctgcggctgcagctggagcaggccaacaagttgtgtcgcatcctgcagtaccgcctc
cgcaaggccgagcgccgcagcctcagggtggcccagactggccaggtggaaggggaactg
gtccgctccctggagcatgacgtcaaggtagcaaagactgtatccctccgcctgcacaat
gagttggagtccgtgcaacagaagacctcccggctggagtgggagaatgaggcacttcgg
gagaggcaacaggagctggaggtggcaaagcaagttcaacaggacgcgatggagaaagcc
agagaaagttctctgaagaggaaaaatgtcagatcaccaaccagcaagactgagaagaag
ctgtctccccaggatgacagtgctgatctgaagtgccagcttcactttgccaaggaggaa
tcagctctcatgtgcaagaagctgaccaagatggtatcggaaagtgagtacatgcatgaa
gttctgtcaaagtaccgctcggcctatggcgacgtagatgctgctgcccactcctctgag
ggtggtactgccaagtccccccacaccagggaggcagaagtcaaggttcacctgcggctg
gtggaggaggaagcgatgctgctgagccgccgtattgtagagctggaggtggagaaccat
ggcctccgggcggagatgagcgacatgagggagagcgtaataggaggaggaggagaagag
gaagaggagcagccacagaagggggccagggacaatggggatctaccactgctttatgtg
agggatgtagaggattgtgaacagagcttgaggatggagtgtatgcagtttgagcaggag
aagggggaagagcagagaaggagtgtgattgagtgttctcaggaggaggtgatggaaata
caccgtagagaccaacctcagacggagaggttgagtcccctcagtcagatccctcgagag
gggtctgtaggtggggaatgggagcccctggacaaccagcagtgttatacacacagaggc
agtgttgcccatgccttgaatgtgaaagaccatgaggcccttcttgccttgcgagatcat
gcctgccttgtgacctcagctatccagctttttgtctcaccggccaagaatggccacagc
tcccctcccttatctccccacatctcccgggcaaagtcttaccctcagggtaaagcccag
cctctggctctggacccactcatgcaaggacacctgtatgaggctctggagcttctgcag
gccatgctgttggccttaatggggagggtggagttattggtgacacaaggcggagagttg
agggttgaaggaaattgggatcccaccgcaatcccatccctggctgatcaggacacacaa
aacaacacagaggtctcagccaagaaggaaacaggtgaaggcctgcgcacagcagtggtg
aaggagagagtaagacgagcaacacagtcagaccacctcgacagctgcagggaccccatg
atgaagctcaccttgaaggtgctctgggtcctccaccagcgcagtgtgaggaagagatct
ggcctggagggcaaagagagcagagatctaatgactatgtctatactacatgggttgctg
cagtacttgggcacagagctgcaggactcagaggacagcatggcaggacaggatgcgaag
gccacatgggcatcagactggaaaggcttagtctccaagatggagtgcagcatgggtaag
actgaggcacaggagtatccagaccagccaggccatgctagaggcacacagagtgagata
actgagacaagaaataagaccaaaccagaccgctctacattagggtccaagaagaagaac
tggtgttacctcagccaagaggctgcccagctagaccgagaagacccctttaagacctgg
gaccaccccatcatgccccctagcttccctaatctaaacttggaccagttgaccctggac
agtagccgcactgccccagagaagactgtcctccgcatctactacagtcccccgtctgca
cggagagtccatctagctcatctgaggcacattaccaacactgatagaaattctactacc
agtgtaatctctgccaggcttagtacgtcccaaagctctctcactcccttatgtctgagg
ctctccgctaacttgagcgacgacatgaaggagatgacagctagcttacggcaggcagtt
cactccagttcgccggagaggaggaaggggagggtgatcgtgagtggggggtggacagtg
gacgtggccaccactgggactcagacccagatgtacccacagatggtgagtgtgggtcta
cagatggatgggcccgacagtgtaactgcagtgagaggcaaccctttacgcctctctgcc
cgctctcaacagatctcgacttcccttgagaggctcccagggaggaccaagcggtccaag
tcaggctccacctccccaaaaatgtaccgcagatactctgcctctgcttcatcttcatcg
tccatctccccttcctccacaactggtttcaccaccacctccaactcctccacctcctcc
tctgccacccctggcagggagggtgttttgtggagcctttcccatcggggtcctgctggg
ccaacctgggcccgccccatcaatcccagagctggtccagggcttattcaccatagcaca
ataaacagtgaattgagcagtggtgggaacaacactaaacccaccagaaaacctggtggt
gccaaccggtacggcctagtcacagagttcctgcgcaaaatgagtggtcgagcagacaag
ccagcacaagcaacagcaccgggcggggggcagaaggggaaatgcagtccaactcataaa
accctggaggttgtgcccactcgcccccctgctgcaccagtagacaggaacgacagtatc
gccaggattaggaaccagagattcatgaagcagagagaggaagcgtgccgcggccagaag
gaggataactgccccagtcaggcccacagtcagaagcaggctttcagaagagacatgagc
ctggagagtaacgtgacactggaggatgggaactatgactgtagcagttccaagtccttg
tccttctgctttgcccgatcatctcgccttggccctgaccaagctacagcaaaatag
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