KEGG   Salmo salar (Atlantic salmon): 106572475
Entry
106572475         CDS       T04363                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sasa01009]
    106572475
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106572475
Enzymes [BR:sasa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106572475
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106572475
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106572475
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD-1st_NSD PHD_2
Other DBs
NCBI-GeneID: 106572475
NCBI-ProteinID: XP_014002168
UniProt: A0A1S3MG40
LinkDB
Position
ssa15:complement(82743858..82779842)
AA seq 1544 aa
MTQPRPDEFKPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPGWQPPFACN
VDRLHFTPRIQRLNELEAQTRVKLNFLDKIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERILYPYNLFQSGANLLAPELA
SKLMRLVSAPELDTFVQKPTLPLDTSDKEYKPHDLAERQQFVQPAESCCNSARRAKRMRA
EVDALVEQSLTHLSEELLINPSGCVKTEPGTEPCENRPNLRRRMGSFVAKPEPEKEIPIL
VKQEPIEPVSEADENKSRYKKKPSLDVPPPAVSVVDLYICLVCGSGSDEDRLLLCDGCDD
SYHTFCLIPPLNDVPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSD
YFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIRNGRFKVSEKDE
MYLKCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLH
WGEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSHGVPIYRTN
QCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEM
ICQMASKANSLDVVLASAVQKDMKDMIREEQDLRDKVRKMGVKHCEQAEYNLLQDDERQC
AKCRTTCYLSAITCPCSPGRLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNAVKQRA
EFYDEWASHVTETLEAKLDKKKSLSVFRSLINKSELKMFPDNDLLRQLRLVTQDAEKCSS
VAQQLLNGKRQTRYRCGGGKTQSQLTVEELRSFVRQLYNLPCSLPQAPKLKELLNCIEDF
QTHSEKLLADETTGTADIQSLLDVSFDFDVELPELPLLRERLAQARWLEGVQQASTQHST
LTLETMRRLIDQGVGLTPHPSVEKAMARLQELLTVSEHWEDKTSSLLKARPPLSIEALSE
TAEKVAGIPAYLPNCLMLKDSISRAREWLQEAEALQDEDSIPLFYNLSDMVIRGQDIPVQ
LGPLKQLESLVAEVQTWKESAAKTFLMKNSHFTLLEVLCPRCEVEAGSPKRKSKKAKDIT
QHSKKKMVKLDCLSDVEKALSETKDSASALATLGEVRLQEMGALSSLRAANESKLLPTAD
CMGLKVCVCQNPPMGAMLQCELCRDAFHSVCVRASSDSRSAQAWLCPHCRRSEKPSLDKV
LPLLASLQRIQVRLPEGDALHYLVERTVSWQQRARQVSSSCGLPDLEESFATPPSPDGKP
TCLTPEWNRTTHDQMVFYTEQRCIPLQDLSVELEELMVEGLLLQVSLPEITQLYHVLLNG
LRTHHTNERTSLQDDDPSDCDKLKQCNSQGKSSPQKDGLIKEVLNGAEKKAKRRLEREAV
EPERRDKAKKLQNKRQKMNKEKNLERKAASTTSSPHSDFSQSDDSEEEMCPAEGCQQPEG
DEVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCDNCTISDGR
NT seq 4635 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccacctccggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttttataaataagatccgtccaattgcggaa
aaaactggcatttgtaaggtccgcccgcctccgggctggcagcccccatttgcatgtaat
gttgacagactgcacttcactcctcggatacagaggctcaatgaactggaggcacagacc
agagtcaagcttaacttcttggacaagatcgcaaagttctgggagttgcaggggtgttct
ctgaagattcctcatgtggaaaggaagatattggacctttatcaactcaacaagaatgtt
gcagatgagggtggatttgatattgtgtgtcgcgacagacgatggacggcgattgcactt
aagatgggctttgctccaggcaaggctgtgggttctcacctacggtcacactatgagaga
atcctctacccctacaacctcttccagagtggagctaacctcctggcaccagagcttgct
tccaagctgatgcgtttagtgtctgcccctgaacttgacacgtttgtccagaagccaacc
ctgccacttgacacgagtgacaaggagtacaaaccccatgacctggccgagaggcagcag
tttgtccagccagccgagtcctgctgcaacagcgcccgcagagcaaagcggatgagagct
gaggtggatgctcttgtcgaacagagcctcacacacttgtcagaagaactcctcataaac
ccatccggttgtgtgaagactgaaccaggaacggaaccctgtgagaacagaccaaatctg
aggaggaggatgggctcctttgttgccaagcccgagccagaaaaagaaattcccattcta
gtgaaacaagaacctatcgagccggtgagcgaggcagatgaaaacaagtctcgatataag
aaaaaacccagtcttgatgtcccacctcctgcagtgagtgtagtggacctgtatatttgt
ctggtgtgtggcagcgggagtgacgaggatcgtcttctgctgtgtgatggctgtgatgac
agttaccacaccttctgtctcataccccctctaaacgacgtccccaaaggagactggagg
tgccccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggttttgagcag
gcatacagggactactctttgcgggcttttggtgaaatggcagactccttcaaatctgat
tacttcaacatgccagttcatatggttcccacagagttggtggaaaaagagttctggcgc
ttggtgagcaccatcgaggaggacgtcacagtggagtatggagcagatatagcctccaag
gagtttgggagcggattccccatcaggaatggaagatttaaggtttcagaaaaggatgag
atgtacctgaagtgtggctggaatctgaacaacatggcgatgatggacccgtcagtgttg
actcatgtcacagcagacatctgtgggatgactctaccttggctctatgtaggcatgtgc
ttttcctccttctgctggcacatcgaggaccactggagctactccatcaactacctgcac
tggggggagccgaagacatggtatggagcacctggctttgctgcagaacagcttgaggct
gtgatgaagaaactggctccagagctgtttcagattcagcctgacctcctccaccagctg
gtcaccattatgaaccccaacaccctcatgtctcacggggtccctatttacagaacaaat
cagtgtgctggtgagtttgtcatcaccttccccagagcttatcacagtggtttcaaccag
ggtttcaacttcgctgaggctgtaaacttctgcactgtggactggatggcattaggccgc
cagtgcgttgaccactacagactgctgcatcggtactgtgttttctcgcacgacgagatg
atctgccagatggcctccaaggccaacagtctggacgttgtcctggcatcggctgtccag
aaagatatgaaggatatgatcagagaggagcaggacctacgagataaagtccgcaagatg
ggggtgaagcattgcgagcaggcggaatacaatctcctgcaggatgacgagcggcagtgt
gcgaagtgtaggaccacatgttacctgtctgccatcacctgcccctgcagccctggccgg
ctggtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacacactg
aattatagatttacactggatgatctgtaccccatgatgaacgcggtgaagcagcgagct
gagttctatgacgagtgggcctcccacgtgacagagactctggaggctaaactggacaag
aaaaaaagcttgtcagtcttccgctcgctcatcaataaatcagagttgaagatgttccct
gacaacgacctcctgcgtcagctccgtttagtcacacaggatgcagagaaatgctcctca
gttgcccagcagctactcaacggcaaaaggcagaccaggtatcgctgtggtggagggaag
acacagagccagctgactgtggaggagctgaggtcatttgtcaggcaactgtacaacctc
ccctgcagccttccccaagcccccaaattaaaggagctcttgaattgcatcgaagacttc
cagacacacagtgagaagctcctggcagacgagaccaccggtacagcagatatccagagt
cttctagacgttagctttgactttgacgtggagctgcctgaacttccgttactacgggag
aggctggcacaagcccgctggctagagggggtgcagcaggccagcacccagcactccacc
ctgaccctggagaccatgcggaggctgatagaccagggcgtgggtctgacccctcacccc
tctgtggagaaggccatggctcgcctgcaggagctgctaactgtgtctgaacactgggag
gacaagaccagcagcctcctcaaggccaggccccccctctctatagaagccctctctgaa
acagctgagaaggtggctgggatccctgcttacctccccaattgtctgatgctgaaggac
tccatcagtagggccagagagtggcttcaggaagctgaggcacttcaggatgaagattcc
attccattgttttacaacctctctgatatggttattcgaggacaagacatcccagtccag
cttggccctctaaagcagctggagtccctggtggcggaggtgcagacctggaaagagtct
gcagctaaaactttcctcatgaaaaactctcacttcactctgcttgaggttctgtgtcca
agatgtgaagttgaagcaggttctccgaaaaggaagtccaaaaaagctaaagacatcact
cagcacagcaagaagaagatggtgaagcttgactgtctcagtgatgtggaaaaagccctc
tcagagaccaaggactctgcttctgctctggcaactcttggggaggtgcggttacaggag
atgggggccctctcctctctccgggcagctaacgagtccaagctccttcccacggcagac
tgcatgggcctgaaggtgtgtgtgtgtcagaatccccccatgggagcaatgttacagtgt
gagctctgccgggacgccttccacagcgtgtgtgtgagggcttcctcagactcccgttca
gcccaggcctggctgtgcccacactgccgacgctctgagaagccctccctggacaaggtc
ctgcccttgctggcatcgctgcagcgtatccaggtgcgtctgccggaaggcgatgcactt
cactatttggttgagagaacagtcagctggcaacagcgtgcgcgacaggtctcttcctcc
tgtggactaccagacctggaggagagctttgcaactccaccatctccggatggaaagcca
acgtgtttaactccagagtggaacaggacaactcatgatcagatggtcttctacaccgag
caaagatgcattcctctgcaggatcttagtgtggagctggaggagctgatggtggaaggg
ctcctgctgcaggtgtctcttccagagatcacacagctctaccatgtgttactgaacggc
ctgaggacgcatcacaccaacgaacgcacgtcactgcaagatgacgacccctcagactgt
gacaaactcaagcagtgcaactctcagggaaaaagctctccacaaaaggatgggttgata
aaggaagtactgaacggagcagagaagaaggctaagcgacgcctggagagggaggctgta
gagccagagcgcagggacaaggccaagaagctccagaacaagagacagaaaatgaacaaa
gagaagaacctggaacgcaaggcggcatcaacgacctcgtctcctcactccgacttctcc
cagtcagatgactctgaagaggagatgtgtccagcagagggatgccagcaacctgaagga
gatgaggtcgactgggtccagtgtgatggcagctgtaaccagtggttccaccaggtctgt
gtgggtgtgacagccgagctggctgagaaagaagactatgtgtgtgacaactgcacaata
agcgatggtcgctga

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