Salmo salar (Atlantic salmon): 106572712
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Entry
106572712 CDS
T04363
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecule (CAM) interaction
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106572712
04517 IgSF CAM signaling
106572712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106572712
04090 CD molecules [BR:
sasa04090
]
106572712
04091 Lectins [BR:
sasa04091
]
106572712
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106572712
CD molecules [BR:
sasa04090
]
Proteins
106572712
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106572712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Pur_ac_phosph_N
C2-set_3
V-set_CD47
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
106572712
NCBI-ProteinID:
XP_014002612
UniProt:
A0A1S3MHE8
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All DBs
Position
ssa15:complement(90826458..90939787)
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AA seq
1293 aa
AA seq
DB search
MPHTQQHQVGSRGQRPPLLLHPILLLPLFSLLLSHAPQLSQGAIHIPSNYQINELKKPPV
ITTQPESIIVFSAEDILLTCEASGNPPPNFRWTKDGEEFITANDPGLSVSLGSGTFMKTG
VVSGPMSQYKGKYSCYADNALGTAVSNEVQLITENAPALQKEQKVKKKVEEGESVVLKCN
PPISTVPPVIHWMDERLHHIELNDRVTQGRDGNLYFSHVTVDDTRIDYTCNVQYLSARTI
LSKEPITLTVTTSNSVVRSRRPQMMRPSGTHSTYQALRGQSLELECIVQGLPTPTVKWVR
KDGQLSESRTSRHLSDRLLRISNISDSDGGEYQCSVNNSQGKVTHTYTVSVEAAPYWTKE
PVSQLYAPGETVRLDCLADGIPSPAVAWSINGKPITSIDSTPRRTVRDGALILRDVVFTD
TAVYQCQAHNKHGTILVNTYIFVIELPPQILNADGQKYNFTEGQKAVLQCQTFGSPRPKI
TWERNSSASLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINADLDVLNRTVI
LSPPGSLRVQPGKTAIFTCLAQVDPKLTPPHIQWKRSGQELFQSYAEDKYTFEGPDLIVA
NVQTEDEGVYTCEVITNLDRVEASGSIIVVDRPDPPTQLRVSDPKDRNVTLSWTAGDNHN
SPVIEFVVEFEDGDSKERGWEELKRVSGTNESVTVSLQPYVSYRFRVISINNIGKSDPSM
PSDLHSTPPQAPDNNPENVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWRRVVGDTT
WYSNVSTEPPYIVTEVGNFSTFQIKVQAANQKGEGPELDPVTGYSGEDIPLEAPKNVGIV
LLNSSAIRVTWEPVNEKTVRGHLLGYKIHLTRFGSRGHHQGRRARDPETSVEVETGPKEE
KRVLGGLRPYSHYALNVTVFNSKGEGPPSKTLSFETDEGAPGPPMSLLLDSHAGTEMTLH
WTPPAQPNGVLKGYLLQYQIVKSDDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRGRT
LAGDGEPITREGATTLDGAPPSNISLSVGEKSVNMSWVPGQRQRSVGFQVQYLNKQYGGK
WKQSEKLNSSASFYQLKGLTPGSQYRLRFTFSNNTFWETEITTKGAGVMDVQTGFATQGW
FIGLVSAIVLLLLVLLILCFIKRGKGGKYSVKDKEEGQVDSEARPMKDEAFGEYSLWTRS
LESDNEEKRTASQPSLCDESKLCTSDDNLDGYNNGSIAVTEVTMEDSLVSQYSRPSEATP
DLGTLQDSSPLNPNTITPTPTTNNLPNSAAILD
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacactcagcaacatcaggttggcagtagggggcaacgcccccctctcctcctc
caccctatcctcctcctccctctcttctctctcctcctatcccacgccccccagctcagc
caaggagccatacacataccttctaactatcaaataaatgaacttaagaaacccccagtg
atcaccacccagcctgagtccatcattgtgttcagtgctgaagacatcctcctgacctgc
gaagcatcagggaaccctcctcccaatttccgctggactaaagatggagaagaatttatc
actgccaatgacccgggcctgtcggtgtctctgggttctggaaccttcatgaaaacgggg
gtggtgtcaggccccatgagccaatacaagggcaaatacagctgctacgctgataacgca
ttaggaactgctgtgtctaacgaggtccagctcatcactgagaacgccccggccctgcag
aaagagcagaaggtgaaaaagaaggtggaggaaggagagagtgtggtactgaaatgtaac
cctcccatcagcactgttcctcctgtcatccactggatggacgagcgattgcatcacatt
gagctaaatgatcgtgtaacccagggtcgggacgggaacctctacttctctcacgtcacc
gtcgatgacacccgtattgactacacctgtaacgtccagtacctcagtgctcgcaccatc
ctctccaaggaacccatcaccctgactgttacaacctctaactcagtggttcggagccga
aggccccagatgatgaggccctcagggacccacagcacttaccaagccctccgaggccag
agcctggagctagagtgcatcgtccagggcctccctacccctacagtcaagtgggtgagg
aaggacggtcagctgtccgagtcccgtacgtccagacatctgtctgaccgtctgctgcgc
atcagtaacatctcagatagcgacgggggagagtaccagtgttcagtcaacaactcacag
ggcaaggtcacacacacctacaccgttagcgtcgaagcggctccgtactggaccaaggag
ccagtaagccagctctatgccccaggagagacggtgagactggactgtctggctgatggc
atcccgtctcctgctgtcgcctggagcatcaatggaaaacccatcacaagcatagactca
acccctaggcgtactgtgagagatggagctctgattctgagagatgtggtcttcactgat
acagcagtctaccagtgtcaggcccacaacaaacacggaaccatcctagtcaatacctac
atcttcgtgatcgaactgcctcctcagatcctgaatgccgacggacagaaatacaacttc
acagagggacagaaggctgtactgcagtgtcagacctttggctctcccagacctaaaata
acatgggagaggaacagcagcgcttctctactggctgagcccagggttaacctgctgacc
aatggaaacctccagatcaccaatgtctcccatggcgacgagggcctgtacacctgctcc
gttagcaacaccaacctgtcaatcaacgctgacctggatgtgctgaacaggacagtgatc
ctgtctcctcctgggtctctgcgtgttcaacctggtaagacggccatctttacctgcctg
gcacaggtggaccccaaactgactcctccacacattcagtggaagaggagcggacaggaa
ctctttcagtcatacgccgaggacaagtacacatttgagggcccagacctgattgtggcc
aatgtgcagacagaagacgagggtgtttacacctgtgaggtcatcaccaacctggacagg
gttgaggccagcgggtccatcattgtagtcgaccgtccggacccccccacccagctccgg
gtctctgaccctaaggaccgcaatgtcaccctgagttggaccgcaggagataaccacaac
agccctgtcatagagtttgtggtggagtttgaagatggtgactctaaggagcggggttgg
gaggagctgaagcgagtcagtggaactaatgagagcgtgaccgtttctctgcaaccatac
gtgtcctaccgcttccgggtcatctccatcaataatatcgggaagagtgaccccagcatg
ccctctgaccttcacagcaccccacctcaagctccagacaataacccagagaatgtgagg
agtgagtctacagacccagacaccctggtcatcacatgggaggagatggacaggcgtgtg
tttaacggcccagagttccactacaaggtgttctggaggagggtggttggtgacacaacc
tggtactctaatgtctccactgagccaccatacatcgtcactgaagtgggcaacttctcc
acctttcaaatcaaagttcaggctgccaatcagaaaggagagggacctgagctagaccct
gtgactggttactctggagaggacatccccctggaggctcctaagaatgtgggtatagtg
ctgctcaacagttcagccatcagggtaacatgggaaccagtgaacgaaaagactgtcaga
ggacacctgctgggatataagatccatctgacgaggtttggctccaggggccaccaccaa
ggccgtagggctagagacccagagaccagtgttgaggtggagacagggcccaaagaggag
aagagggtcctggggggtctcagaccctactctcactacgccctcaacgtcactgtgttc
aacagcaagggagaggggcccccctccaagaccctgtccttcgaaactgacgagggagct
cctggcccccccatgtccttactcctggacagccatgcaggcacagagatgaccctacac
tggacacctcctgcccaacccaacggggttctcaaaggatacctgctgcagtaccagatc
gtaaagagtgacgacagcccgatgcaggtggagaccatagacgatcacaaggtcactcac
ctgaccctgaagcagctggaccctcacagccgctaccgcttctacctgagggggcgcacc
ttggccggggatggagagcctatcaccagggagggcgccaccacactggacggagctcct
ccgtccaacatcagcttgtctgtaggagagaagtctgttaacatgagctgggtgccagga
cagagacagaggagtgtgggcttccaggtccagtacctcaacaagcaatacggtgggaag
tggaagcagtctgagaagctgaactcgtctgcatcattctaccagctgaaaggtctgacc
ccggggtcacagtaccgcctcagattcaccttcagcaacaacaccttctgggagactgag
atcaccacaaagggagcaggggtgatggatgtgcagacaggctttgctactcagggctgg
tttattgggctcgtgagcgccatcgtgctgttgctgctggtactgcttatcctctgcttt
atcaagaggggcaaagggggaaagtattcagtcaaagataaggaggagggtcaggtagac
tctgaggcgcgccctatgaaggatgaagcattcggagagtacagtctttggacaagatct
cttgagagtgacaacgaggagaagcggacagccagccagccgtctctgtgtgatgagagc
aagctgtgtaccagtgacgacaacctggatggctataacaacggtagcattgctgtcacc
gaagtgaccatggaagactccctggtcagccagtacagccggcccagcgaagccaccccg
gacctgggcacactgcaggacagctcccccctcaatcccaacaccatcaccccaacaccc
accaccaacaacctgcccaactcggctgccattttagattag
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