Salmo salar (Atlantic salmon): 106572790
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Entry
106572790 CDS
T04363
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04672
Intestinal immune network for IgA production
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106572790
04514 Cell adhesion molecules
106572790
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106572790
09142 Cell motility
04820 Cytoskeleton in muscle cells
106572790
04810 Regulation of actin cytoskeleton
106572790
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106572790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106572790
04515 Cell adhesion molecules [BR:
sasa04515
]
106572790
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106572790
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106572790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
106572790
NCBI-ProteinID:
XP_014002742
UniProt:
A0A1S3MHS8
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All DBs
Position
ssa15:complement(94251457..94261846)
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AA seq
776 aa
AA seq
DB search
MRKLWLTVVVLLIHFTSLRGSMVLDGRCLSKPTCTECLRSLGCAWCKQKGFLAQGEPDER
RCDREEALRNRHCSDGQILNPQPAIRSRAEEPMGTVVQLEPQNLHLKLRVGMPQSFEVRF
RRSEGYPIDLYYLMDLSYSMKDDLENIRNLGLEVVTAMKNITSAVRIGFGSFVDKVVDPY
VSTVEAKLANPCIEGGKGPCQPAFSFKHVLKLTEDVEEFERKVSKQSISSNLDGPESGFD
AIMQVAVCQDDIGWGNVTRILVYTSDDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDT
VYDYPSVGHLSQVLSANNIRLIFAVTDQNIENYEALSEMIPQSVVGLLEDDSNNVVQLIS
EACNNLSSSILLEHRDVPPGLGVSYSSHCGDDRLAQGQDRGECSDVRINQQVNFTVTVTS
SSCLSKTESFIIKVQGINEELRVTVETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGH
TGQRCECETQPDKDTSLAVEALCSPAQTNSTGTPLCSGRGSCVCGQCICWGQHRGQHCQC
DDISCNRHNNMICGGNGKCDCGNCECFHNYTGPACECSTLTDQCQTSNDGICSHRGQCEC
NECHCHPGFFGRHCTKPLAPCDTYRACVDCMLHESAINMCHRRCGSAKPIRINGTQSFTC
QDDTVRFNVELINTGDIFVYYTDTSRGIDPWIINMGKAVVGIVLPGVIMIIIYRLMLEVS
YQRERRRFLKDKENICWEDTQNPLFQEALTTFTNPMHVLEPDADCATSTFGKIKQM
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagttgtggctgactgtggtggttcttctgatacacttcacttcactgagagga
tctatggtcctggatggaagatgcctgtctaagcccacctgtactgagtgtctgagaagc
cttggctgtgcctggtgtaaacagaagggtttcctggcgcaaggggagccagacgagcgt
cgctgtgacagggaggaggctctgagaaacagacactgctctgacggacagatcctgaac
ccccagcctgcaatacggagcagggcagaggagccaatggggaccgtggtccagctagag
ccacagaacctccaccttaagctaagagtcggcatgccccagtcattcgaggtgaggttc
aggcgttcagagggttatcccatagacctgtactacctgatggacctgtcttactccatg
aaagatgacctggagaacattaggaacctaggactggaggtggtcactgccatgaagaac
atcaccagtgctgtcaggataggctttggttcctttgtggataaggtggtggacccctac
gtcagtacagtggaggccaaactggccaacccatgcatcgaggggggcaaaggcccctgc
cagcctgccttcagcttcaaacatgtactgaagctcactgaggacgttgaagagtttgag
aggaaggtgagcaagcagagcatctccagtaacctagatggcccagagtcaggctttgac
gccatcatgcaggtggctgtctgtcaggatgacattggctggggtaatgtaactcggatc
ctggtctacacttcagatgataccttccacctggcaggtgatgggaagcttgctgggatc
taccaaccaaacgacgggaaatgccacctgaatagcaatgggctctataataaggacacc
gtttatgactatccctcagttggacacctatctcaggtcctatcagccaataacatcagg
ctgatctttgcagtgacagaccagaacattgaaaactatgaggcactcagtgagatgatc
ccccagtcggtggtgggcctcctggaggatgactccaacaatgttgttcagctcatctct
gaggcctgcaacaacctatcgtcttccatcctcctggagcaccgtgacgtcccaccaggc
ctgggggtctcctacagctcccactgtggtgatgacaggctagctcaggggcaggacaga
ggggagtgcagtgatgtcagaatcaatcaacaggtcaatttcacagttactgtgaccagc
tcgagctgtctgtccaagacagagtctttcatcatcaaagtgcagggtatcaatgaagag
ctgagggttaccgttgagacgctgtgtgattgtgactgtcaggactccgaggaacagtca
tcccagtgtcatggcaatggaacattccactgtggtatctgtagctgtgattcaggacac
acaggccagcgttgtgagtgtgaaacacagccggacaaagacaccagtctggccgtagag
gccctgtgttcacctgcacagacaaacagcacaggcacaccactgtgcagcggccgtggg
agctgtgtgtgtggccaatgtatctgctggggccaacacaggggccaacactgccagtgt
gacgacattagctgcaaccgtcacaacaacatgatctgtggcggtaatgggaagtgtgac
tgtggtaactgtgagtgtttccataactacacaggccctgcatgtgaatgctctaccctc
acagatcagtgccagaccagtaacgatggaatctgctctcaccgaggacaatgtgaatgt
aatgaatgccattgtcaccctggtttctttggcaggcactgcaccaagcccctggcacca
tgtgacacataccgggcctgtgttgattgcatgttacatgagtcagccataaacatgtgt
caccgtcgctgtggctctgccaagcctatccgcatcaatgggactcaatcattcacctgt
caggatgatactgtacgctttaatgtggaactcataaatactggtgacatttttgtctac
tacacagatacttcaagagggattgacccatggattataaacatggggaaggcagtggta
ggaatcgttttaccgggtgtcatcatgataataatctaccggctgatgttagaagtgtcc
taccagcgggagcgtagaaggttcctgaaggataaggagaatatctgttgggaagacact
caaaatccactgttccaagaggccttgacaacattcaccaaccccatgcatgtgttggag
ccagatgcagattgtgctacatcaacctttgggaaaataaaacaaatgtga
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