Salmo salar (Atlantic salmon): 106572922
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Entry
106572922 CDS
T04363
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
sasa04980
Cobalamin transport and metabolism
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106572922
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
106572922
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106572922
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106572922
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106572922
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106572922
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106572922
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
106572922
HMT complexes
COMPASS/SET1 complex
106572922
MLL-HCF complex
106572922
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
106572922
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
106572922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
106572922
NCBI-ProteinID:
XP_014002983
UniProt:
A0A1S3MIE4
LinkDB
All DBs
Position
ssa15:100209519..100273759
Genome browser
AA seq
1890 aa
AA seq
DB search
MTSGNSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPPTSATTTPGVSPATSLPVNSPK
SPVTASAASPQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHATTGTSIVTV
RQANQGGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPST
ATMQLPAGATIVKTVAMSPGAQTAKVASPVMVSNPATRMLKTAAAQVGTSGVATPGTPSR
PIITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLTAANQGQNKVMSG
KDVQHWLSNLSNLGKVMSVVQTKPGQTGAVTGQAGSSLQHIIQTKGPLPAGTILKLVTSA
DGKPTTIITTSQAGTAGGKPTILSYSGMPTTTTKPGTHIIKTIPMSAIGQAGVTGSGMKS
PITIITTKMMTPGTGTPGKIISAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRL
VSPVTVSGVKPNVTTLVVKGTTGVTTFGTVTGTVSSSLAGGSVATATPITTLGTMTTLPG
QVTVAAAQAGAQPTQVTLITTPSGVDAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVT
LVCSNPPCETHETGTTNTATTASANMTGNGGVERMCTNPPCETHETGTTNTQTTASSNMG
QVQQVCTNPPSETHDTGTTNTQTIASCNMGSNQQQQGSSVTNNTSGSDPPSSPCSSSSGA
VSPSSVSGTSSVPGVLRPETLRTGTTYTSTTARSNMGSDKMGMTLSSSSSDNQSKSSNAG
GGGGSPLTSSVCSSPPCETHQTSPTVTGAEGSSATQVCSNPPCETHQTSPTVTGAEGSSA
TQVCSNPPCETHQTSPTVTGAEGSSATQVCSNPPCETHQTSPTVTGAEGSSATQVCSNPP
CETHQTGTTATSTQANSSMGNGQTTGTVQKVCSNPPCETHETGTTNTPSQTTSNLAGTGT
VQRVCSNPPCETHETGTTNTATTAQPGDSTQGDNGTTEAPSSSSVTTESSAVVASGRAVT
TVTQSTPTPGPSVPEISSMSGSSEAMVAACIEGEEAMQTDCLPEGTVRVVTLEEAAAAGI
QVHVEGMEEQNQGEQEGLPAELMSEGGSVGQQTLMVTGLTPEELAVTAAAEEAAQHAATE
EANAQAMAIQAVLQAAQHAVMNEGDGGHHTTTIPIVLTQAELAALVQQQQQLQEAQALAQ
AAAAAAAAAQHNQPTEGLAPADSLNDPASESNADELAAAVTQAVARLAPSCTLTPTQTMM
ATSPAKIQAATPMAEGVNGIESAAGRPGPSPAVAKAPLKKDNQWFDVGIVKVTNTVVTHY
YLPTDDQATVDDDSGAIPDYSQMKKMELQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLP
GFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTTTPAQ
LAFMRVFCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEVGK
DGVAAKPTAKRPGSSPDMKATGPKKARSDQ
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgggaactctggctcagttctgcagccacggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaatcaaagaattgatg
gttgttttcgggggaggcaatgaaggaattgtggatgagctacacgtatataacacagca
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggtttgtgtgcgacggcacaaggctgctggtgttcggagggatggtggagtatggcaaa
tacagtaacgatctgtatgaactgcaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggccctcctccctgtccccgcctgggacacagcttctccctagta
gggaacaaatgcttcctgtttggaggactggctaacgacagtgaggaccccaagaacaac
atccccagatacctgaatgatctgtatacgctggagctgcgcgccggctccagtgtagta
ggctgggacatccccatcacctacggggtgttgcccccacccagagagagccatactgcc
gtcgtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagc
ggctgtcgactgggggatttgtggaccctggatatagacaccctgacatggaataaaccg
tctatcaacgggacagctcctcttccccgcagtctccactctgccacaaccatcaccaac
aagatgtacgttttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcaccaacacactggcctgtctcaacctagactcgatggcg
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcacgtctctacgtgtggagcggccgggacggataccgcaag
gcctggaacaaccaggtgtgctgtaaggacctctggtacctggagacagagaagccccgc
cccccgtcacgagtgcagctggtgagagccaataccagtagcctagaggtgagctggggg
gcggtacctaccgcagacacctacctgttgcagctgcagaagtacgatatccctcccacc
tcagccaccaccacccccggggtcagccccgcgacatcactaccggtcaactcccccaag
agccctgtcacagcctctgcagcgtccccgcagggcctgcctctccaaggcataacgctg
gtcccctcccccaccaccacaatgcctgggagtccactggctgctgctaatgcacgcggg
ccagctatcttgaaggtgtctgctcctcacgccaccacaggcacctccatcgtcacggtg
agacaggccaaccagggcgggaaatctcccgtaacggtgacgtcacttcctgccggggtc
cgcatggtggtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatg
agtggcatggctgcgttggctgcagcagctgcggccacccagaagatcccgccctccacg
gccaccatgcagctgccagccggtgctactatagtcaagaccgtggccatgagccccgga
gcacagactgctaaagtagcttcgcctgttatggttagtaacccagcaacccgcatgctg
aagactgctgccgctcaggttggcacgtcaggtgttgccactcccggaactccttctcgc
ccaatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggtt
accacggtagtgggaggagtcaccaagacaatcaccctggttaagagtccccttactatg
gggggaggtggaacactgctgactgcggccaaccagggtcaaaacaaagtgatgtctggc
aaggacgtgcagcattggctgtctaacctgtccaacctgggcaaggtgatgtccgtggtc
cagaccaagcctggtcagaccggagctgtgacgggacaggctggctccagcctccagcac
attatacagactaaaggtcccctcccggcgggcaccatcctgaagctggtgacgtcagcg
gacggcaagccaaccaccatcatcacaacgtctcaggctgggaccgcgggaggaaagccc
accatcttatcttacagcggcatgcccaccaccaccaccaagcctggcacgcacatcatc
aagaccatacccatgtctgccatcggacaagcaggagtgacaggaagtggtatgaagtcc
cccattaccatcattaccactaagatgatgacaccaggcactggaacaccaggcaagatc
atcagcgcaatgcccagagctggggctggccagcagggactcacacaggtggtgctgaag
ggtgctcctggacagcccgggactattttacggaccgtccccatgggaggagtacgtctc
gtctccccggttactgtttccggcgtcaaacctaacgtcaccacccttgtcgtcaaggga
accacgggtgtgacaacgtttggtacggtcactggcacagtgtcttcaagcctggcgggt
ggaagcgttgccacggctacccccatcaccaccttgggcaccatgaccactctgcctgga
caggtcaccgtcgccgcagctcaggcgggagctcaacccactcaggtgaccctaatcacg
acccccagtggtgtggatgctcagcctgtccacgacctccctgtctccatcctgtcctcc
cctacttccgccgacccctcgtccacccagcccgaggcaggcgacccaggaacggtaacc
ctggtctgctcaaacccaccctgcgagacccacgagaccggcactaccaataccgctaca
acggcctcggctaacatgactggtaatggtggggtagagaggatgtgtacaaacccgccg
tgcgaaactcacgagaccggcaccaccaatactcaaacgacggcgtcctccaacatgggc
caggtgcagcaggtgtgcaccaacccgccgtcagagactcacgatacaggtaccaccaac
acccagaccatcgccagctgtaacatgggatctaaccagcaacaacaaggttccagtgtg
accaacaacaccagcgggtctgatcccccgtcctctccgtgctcctcttcctccggagcc
gtctcgccctcgtctgtctctggtaccagctctgtccccggggtgctacgaccggagact
ctgagaacggggaccacctacacctcgaccaccgcgcgctctaacatgggttctgacaag
atgggcatgacgcttagctcttcgtcctcagataaccagagcaagtcatccaacgctggt
ggtggaggaggatccccactcacctcttctgtctgctccagtccaccttgtgaaacacac
cagacaagccccactgtgaccggagctgaaggcagcagcgccacacaggtctgctccaat
ccaccttgtgaaacacaccagacaagccccactgtgaccggagctgaaggcagcagcgcc
acacaggtctgctccaatccaccttgtgaaacacaccagacaagccccactgtgaccgga
gctgaaggcagcagcgccacacaggtctgctccaatccaccttgtgaaacacaccagaca
agccccactgtgaccggagctgaaggcagcagcgccacacaggtctgctccaatccacct
tgtgaaacacaccagactggcactaccgctacgtcgacgcaggccaactccagtatgggc
aacgggcagactacagggacagtgcagaaggtgtgttccaatccgccgtgtgaaacacac
gaaacgggcaccaccaacaccccgtctcagactacgtccaacctggcgggaacgggaacg
gtccagagagtgtgttccaatccgccgtgtgaaacacacgaaacgggcaccaccaacacg
gctactacagcccagcctggtgactcgacacagggagacaacggaactacagaggctccc
tcgtcgtcctcggtaaccacagagtccagcgccgtggtggcgtctggtcgagcagttacc
acggttacccagtccacacccacacctggaccctccgtacctgagatctcgtcgatgtct
gggtcgtctgaggcgatggtggcggcatgtatagagggagaggaggccatgcagaccgac
tgtctcccagagggcacggtgagggtcgtgaccctggaggaggctgctgcagctgggata
caggtccatgtggagggcatggaggaacagaaccagggggagcaggagggcctgcctgca
gagctgatgtctgaaggtggctcggtgggccagcagaccctgatggtgacgggtttaacc
cccgaggagctggctgttaccgctgctgctgaggaggcggcacaacacgctgctactgag
gaggctaacgcccaggccatggccatacaggctgtcctgcaggccgcacagcacgctgtc
atgaatgaaggagacggtggccatcacaccaccaccatccccattgtgttgactcaggct
gaactggcagccctggttcaacaacaacagcagctacaggaagcccaggccctggctcag
gcagcagcggcggcagcagcagcagcacagcacaaccagcccaccgagggcctggcccca
gcagacagcctgaacgacccagcgtcagagagtaacgctgatgagctggctgctgcagtg
acccaggctgtggcccggttagccccgtcctgcaccttaacaccaactcagacaatgatg
gcgaccagtccggctaagatacaggcagctacgcccatggcagagggggtcaatggaata
gagtctgccgcagggaggccaggaccgtctcctgcggtggccaaagccccgctgaagaaa
gacaaccagtggtttgacgttggcatcgtcaaggtgaccaacaccgtggttacgcactac
tacctgcccactgacgaccaagccactgtcgacgatgactctggggccatcccagactac
agtcagatgaagaagatggaactccagcctgggacggcctataaattcagagtggccggg
atcaacacttgtggccgggggaacttctcagaggtctcagccttcaagacctgtctacca
ggcttccccggagctccttgtgctatcaagatcagcaagagcccagacggagcccacctg
acctgggagcctccgtccgtcacatctggtaagatcatcgagtactcggtgtacctggcc
atccagagcgcccagagcggggagcaggccaagcccactaccaccaccaccccagcccag
ctggctttcatgcgggtgttctgtgggcccaacccttcctgtctggtgcagtcgtccagc
ctctccaacgcgcacatagactacaccacaaagcctgccatcatcttccgcatcgcagcc
cgcaacgagaaaggatacggccctgccacgcaggtcaggtggctccaagaggtagggaaa
gatggcgtcgcagctaagcctactgccaagagaccaggctcctcgcctgacatgaaagct
actggtccaaagaaggccagatcagaccagtaa
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integrated database retrieval system
