Salmo salar (Atlantic salmon): 106572978
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Entry
106572978 CDS
T04363
Name
(RefSeq) neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106572978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106572978
04090 CD molecules [BR:
sasa04090
]
106572978
04091 Lectins [BR:
sasa04091
]
106572978
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106572978
CD molecules [BR:
sasa04090
]
Proteins
106572978
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106572978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Tissue_fac
Ig_4
C2-set_2
Ig_5
Glyco_hydro_36C
Motif
Other DBs
NCBI-GeneID:
106572978
NCBI-ProteinID:
XP_014003049
UniProt:
A0A1S3MIZ8
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All DBs
Position
ssa15:102705160..102744402
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AA seq
1283 aa
AA seq
DB search
MCVSQYQRGSSPPALLLFPLFLLSSSHLLAHGAIQIPKNYKVQNMLQPPILTKMPESLTA
FSLDDVMLLCEATGIPTPSFRWVKDGKKLNWMGHTGSGNFTAHGDMPLSDYQGHYRCYAD
NTLGTAMTHTVKLITESTPTLPKQKRSHKTAEEGASVVLHCNPPRSSTIPHIHWMDKKLL
HIGQSERVTTGLDGNLYFANVLKNDSRDDYTCNAQYIAARTILPKEPISLTVTPSNDVAR
GRKPQLMQPQGPHSSHLALRGHSLILECIPKGLPTPSVLWKHMDVNLSETGAWTDNHGRW
LRFDSITQKADGEYECLASNKHGSVTHSYTVTVEAEPYWVKEPLSLLYSPGETVRLDCQA
DGIPTPTVTWSINGEPVTEVDTDPRRRVSGGVLVLKDVVFGDTAVYQCEATNKHGNILNN
TYIYVIELPAQILSSDGVVYQVTEGGVARLHCEAFGSPRPQVTWESEDLLDVLLSDSRVS
QLTNGTLELFNSSREDSGVYTCSITHSNTSITAHLEVLKRTVMLIGPQAVQVTRGGDSWL
DCHFSFDPHLNRPLILWRKDGQKIMESSPGDKYTTFGNGTLRVTDVQSADGGHYSCEVIT
DLDSVLASGSITVVARPSPPVFLSLSEEQDHNVTLSWTPGNTHNSPTTEFVVEVEEEKHS
KGKWKSHRVNGDVNQLELRLLPYSTYRFRVSGINRLGRSDPSEISEAYNTLPAVPESYPR
HVRSESTEPGTLVIMWEEIDRRLYNGSGFQYKVSWRQIQEQHWSHSHVPHPPYLVNRTRA
FSGYEMKVQAVNSLGEGPHPVPVIGHSGEDYPLASPSNISVSVDNSSARVSWQPVDPNTV
QGHLLGYKIYLKRLGSQGGRERRAMVHREVREIEGGVERGTERKEERWVVEVDGNKTKEV
VTGLKLYSLYELSMTTFNGKGEGPHSPTHPFRTPEGVPGPPASLRFESPSETELTLHWRP
PTQPNGRLVGYVLQYQQISDSRNSPLQVEVIYDPTVTHFLLEGLDPHSRYVFYLRGRTSA
GQGPPITREFATLLDGVPPSNISTVVGETSVNLSWVPGDRYRNHSFHIKYLSKTVGGKWE
ESEQVNTLQAFYSLTGLQPGTQYRLLITHGNYTHWEDEIQTTGPELRGVEGDFATQGWFI
GLISAVVLLLLLLLVLCFIKRSKGGKYAVKDKEESQMDSEARPMKDETFGEYRSLESDGD
EKRSVSQPSLCVESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPAPTGNESSGPAS
PVNLDPPPPPIGPSFAGILDRTS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatctcagtatcagaggggcagtagcccccctgccctcctcctcttccctctg
ttcctcctctcctcctctcatctactcgctcatggagccatccagatccccaaaaactat
aaagtacagaacatgttacagcctcctattctgacaaagatgcccgagtccttaacggcc
ttttcattggacgatgtcatgttgctctgcgaggccaccggcatccccacacccagtttc
cgctgggtaaaggatggtaagaagttgaactggatgggacatactggttctggaaatttc
acagcccatggtgacatgccgctcagcgattaccaaggacactaccgttgctacgctgac
aacaccttgggaacagccatgacacacaccgtgaaactcatcactgaatcgacaccgacc
ctccctaagcagaagagatctcataaaacggcagaggaaggagcgagtgttgttctccat
tgcaaccctcccaggagctccaccatccctcacatacactggatggataagaaactgctc
catataggtcagagtgagcgtgtgacgacaggtctggatgggaacttgtactttgccaat
gtgttgaagaacgacagtcgagatgactacacttgtaatgctcaatacatcgctgccagg
accatcctgcctaaagaacccatctcactcactgtcacacctagtaatgacgtggctcgt
ggcaggaagccccagctgatgcaacctcagggcccccacagctctcacctggccctcagg
ggccacagcctgatactggagtgtatacctaaagggcttcctactccttcagtattgtgg
aagcatatggatgttaatctgtcggagacaggagcctggacagataaccacggcaggtgg
cttcggttcgacagcataacccagaaggcagacggagagtacgagtgtctggcttcaaac
aaacatgggtccgtcacacactcctacactgtcactgtggaagctgaaccgtactgggtg
aaggagcccctgtctctgctgtattcccctggggagacagtgaggctagactgccaggcc
gacggcatccccacccctactgtcacatggagtataaatggagagccagtcacagaggta
gacactgaccctaggcggagggtgagcggaggggtgttggtcctgaaagatgtcgtgttt
ggtgatacggctgtgtaccagtgtgaagccaccaacaaacacgggaatatcctcaacaat
acatacatctatgttatcgagctgccagctcagatcctgtcctctgatggtgtggtctat
caggttacggaggggggcgtggccaggctgcattgtgaggccttcgggtcaccgcgtcca
caggtcacatgggagagtgaggacctcctggacgtcttgctgtcggacagtcgtgtgtct
cagctgaccaatgggacgttagagctgtttaatagtagcagggaggacagtggagtctac
acctgctccatcacacacagcaacacctccatcaccgctcacctggaggtcctcaaacga
acggtgatgctgattggtccccaggctgtacaggttacgaggggaggagactcctggttg
gactgtcatttcagctttgacccccatctgaaccgacccctgatcctctggaggaaagac
ggacagaagatcatggagtcatcgccgggagacaagtacactacatttgggaatggaacc
ctcagagtgacagacgtccaatcagcagacggagggcattactcctgtgaggtcatcaca
gatctggacagcgtattggccagtgggtccatcactgtagttgcccgtcccagccctcca
gtgtttctgtctctgtctgaagagcaggaccacaacgtgactctcagctggacacctgga
aatacacacaactcccccaccacagagtttgtggtggaggtggaggaagagaagcattct
aaggggaagtggaagtcacaccgtgtgaatggagacgtcaatcagttggagttacgcctc
ctcccttactccacctaccgcttccgggtcagcgggatcaacagactggggagaagcgac
ccatcagaaatctctgaggcctacaacaccctacccgcagttcctgaaagttacccccga
catgtgcgtagtgagtctacagaaccaggaacactggtcatcatgtgggaggagattgac
cgtcgtttgtacaacgggtcggggttccagtataaggtgtcatggcgacagattcaggag
cagcactggagccatagccatgttccccatcctccctacctggtgaaccgaaccagagcg
ttctctggttatgagatgaaggtccaggctgtcaactctctgggagaggggccacatcct
gttcctgttataggacactctggagaggactacccgctggcctctccatctaacatcagt
gtgtcagtagataacagctcagcccgtgtgagctggcagccagttgacccaaacacagtc
cagggtcacctgctgggttataagatctatctgaagaggttgggttcccagggaggaaga
gagcgtagagcgatggtgcacagagaggtgagagagattgagggaggagtggagcgaggg
acggagagaaaggaggagaggtgggttgtggaagtggacggcaacaagacaaaagaggtg
gtgacagggctcaaactctattccctgtacgagctgtcaatgacaaccttcaacggaaag
ggggaggggcctcactcaccgacacaccccttcaggacaccggagggagttcctggtcct
cctgcgtctctgcgttttgagagtccgtcggagacagagttaacccttcactggaggccc
cccactcagccaaacggacgacttgtgggatatgttctacagtaccaacagatttcagac
agccgaaacagtcctcttcaggtagaggtgatctatgaccccacagtgacccacttcctg
ttggaaggtctggaccctcatagccgctacgtcttctacctgaggggacgcacatctgcc
ggacagggacccccaatcacacgggagtttgccaccctgctggacggagtacctcccagt
aacatcagtactgtcgttggagaaacatcagtgaatctgagctgggtccctggagacaga
tacaggaaccacagcttccacatcaaatacctcagcaagactgttgggggtaagtgggag
gagtcagaacaggttaacacattgcaggcattctattcgctgacgggtcttcagcctgga
acacagtaccgcctcctcatcacccatggcaactacacgcactgggaggacgagatacag
accaccggtccagagctacgtggtgtggaaggggattttgctactcaaggctggttcatc
gggctgatcagtgctgtggtgttgctgttgttgctgcttctggttctctgtttcatcaag
aggagtaaagggggcaagtacgcagtgaaagacaaggaagagagtcagatggactccgag
gctcggccaatgaaagacgagacgttcggagagtacagatctctggaaagtgatggcgat
gagaagcggtcagtcagtcagccatctctgtgtgtggagagtaaactggggagtgacgac
tccctggccgaatacggagacagtgtcgacatccagttcaacgaggacggctctttcatt
ggtcaatacagcggccgagggcccgcccctacaggaaatgagagctctggccccgcctcc
cctgtcaatctagacccccctcctcctccgataggcccctccttcgccggaatactggac
aggaccagttaa
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