Salmo salar (Atlantic salmon): 106573022
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Entry
106573022 CDS
T04363
Name
(RefSeq) reelin-like
KO
K06249
reelin [EC:3.4.21.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106573022
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106573022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reelin_subrepeat-B
EGF_Teneurin
EGF_TEN
EGF_2
Reeler
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
106573022
NCBI-ProteinID:
XP_014003096
UniProt:
A0A1S3MJS7
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All DBs
Position
ssa16:complement(455740..714861)
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AA seq
2420 aa
AA seq
DB search
MAWASVWGALSCALLALVLGTGVDLGSPPAAGFYPRFNPFFFLCTHHGELEGSGVAEGGG
EVLLTLQIAGNPTAYTAGQEYQVTVSTSMYFDGLLVTGLYTSAPVQSAPIPAPAAFGFGV
MAEQRQFRTQFVCSVVASHVSHQPSTSLSFVWIAPPPSTGCVNFLATATHRGQIIFKDAL
AQQLCEQGAPTESPLRPSLAEIHGNHAVLRDDFDSNLQGELDPSIWSECSNCEVGQQCGV
LMHGRAVTFCEPFRERELTTVPLNTTTASVLQFALGSGTCRFSYSDPSIIVAFSLNKNNG
SNDWITLEKIRAPINSSTVVHLLPLPVHSRGYGVRVRWSQEAPQGPEGYESCWGLDNVLL
VNAAYRPPLLEDNLDPPDTANWLFFPGATVKRACQSEGNTLYFHGNNEEGVGHTFASTRD
IDLHREEGRSYWEEDFESLPTNWDIEGAVYGTHCGEIESGMALVFERDGERKMCTPYLDT
TSFGNLRFYFTMGGGECDPGESHENDVILFGRSEGRRDLVLLDTLPYSSYRTPSVVSVSL
PTDLQTPITQFCLEQRAHGGANRHVWAVDFMQLLPVLPGTHTHVAQFSINLGCGSYQPAN
SVNLEFSTNHGRSWSLLHSECLPDLCAGPHLPHSTIYSSDNYSGWTRISIPLPNAALTET
TQFRWRQSSMGAGNMWAIDNVYIGPSCLRFCSGRGHCSRTGCKCDPGFSGPACELASQTF
SAFLSEGFSSPRLSSYHSFSSLRGAEVSFGCGVLASGKALVFNRDSRRHLVTAPLDSSQA
RYLQFTLRLGSRSILSSCPAPDQPGEGVLLHFSSDNGITWTLLQHYAYKGFHEPRIVSVE
LPPGARKFGVQFRWWQPYHSGRGHDVWAVDEITMTSVLFNTISLDFSNVLDVTQSLGFYL
GHVQPYCQHDWTLSFSGEPNPGSSIRYVETQSMQIGASYTLQFSLVMGCGRDPSPHIDTQ
VRLEFSTNHGLTWHLVKEACLPGMPSCSEFTAPSVYHPSEFTDWRRITLPLPHRAWSSAT
RFRWIQNYYGEQDEWALDDIYIGQQCLQMCHGHGWCDHGHCRCDEGFSGPDCQASSPLSS
SILSDFESQDGLLAMWQEVIGGEVVTPDMGCGVVSSGSSLYFSKAGLRQLVSYDLDTEWA
EFVQFYLRVGGDWVQCNMADSREEGVLLQYSNDGGISWGLIAEMYFTDFIKPRFVHYELP
QASKTPCTRFRWWQPLHSGDGYDQWAIDDVIILSEREKHIIPMANPTMPQNFYEKPAFDY
PLNQMSVWLMLGNEGMEKERNGSFCAPTPSAMVFGRSDGDRVAVTRDLVLRPGYTLQFKL
NIGCESQFSASASVLLQYSHDAGRTWALVKEGCYLGSSGAGGCEGSGRELREPTVYATGD
YESWTRVTIVIPRNVAASKTRFRWFQESSVYRDAPAFALDGVYISEPCPNHCGGHGDCIS
GVCFCDMGYTVEQDSCVPAVASPTELAEGFESKLSPVWQTLSGGQVGGGCGTISEGKALY
FSSSGKREARTVPMDTTNTRLVQFYIRIGGKNVGPTCTRPRSRNEGVIVQFSTNNGVRWQ
FLRELDFGSFLDSQVVTIELPPPAKTPYTVFRWWQPQQGKHSAQWALDDVLIGMNDSSRT
GFHDKFDGTSPLRHNWYRIQGGEITVDCLSLDTALSFNSNTTDKKPRYAESWDFEVSGSS
FLQFELSMGCSKVTTSSHGVRLEYSTDCGRHWALLTPECVPPAIGCAGYTMSSVYTATQY
NRWRRVTVYLPSAANSPRTRFRWIQPHFLPGADGWALDNVLLAPGCPWMCSGHGLCDNGC
CLCDRGYGGAHCVPLTPLPSILRDDFNENLAAEQWPEVYGAERGTLSGEPLKSGTALIFK
GEGLRMLVSRDMDCTSTVYIQFSFKFITKGVPERSHLVLLQYSVNGGISWLLLDEFYFPT
STDTLFIHLPLPTSAQTNATRFRLWQPYNSGKKEEVWVIDDLIIDGSSLNNTPVVSESFE
GGPQDYNWLFYPGGNTGLYCPYQKSGLEDDESAMVFVSSELGEHSITTRDIDVNENTIIQ
FEINVGCTADSSSSNPVRLEFSRDFGATWHLLVPLCSGGPQPSSQCSTELHPASVYYPGT
TQGWRREIIHFGKLRLCGSIRFRWYQGFYSSGSSPPTWALDSVYIGPQCQDMCNGHGSCV
RGTHCVCDSGYSGPDCSQPDTSNPDFLKEDFEGGAVDTDRFRLLSGGKPSRKCGIMSSGN
HLFFSEDGLRMLVTNDMDLSNARFIQFFLRLGCGKASPDPRSQPVLLQFSVDGALTWGLL
QDFFFSNSSNQARFVALEIPLRARTSATRLRWWQPSENGHFYSPWVIDQVVVGGSASGWG
PLEDDFSSMDGRSWLLHPGGTRMPVCGSDGAAFAFIEKSNTRYAVTTDISLGQDAFIQFD
FSASCSVTNSCYGEPQNIYI
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggcctctgtctggggtgccctcagctgtgccctgctggccctggtgttaggg
accggtgtggatttggggagccccccagcagcaggcttctacccccgcttcaaccccttc
ttcttcctgtgtacccaccatggggagctggaggggtctggggtggccgagggaggggga
gaggtgctcctcaccctacagatcgctgggaaccccactgcctacaccgccggacaggag
taccaagtgactgtctccaccagtatgtattttgatggtctgctggtgaccggtctctac
acgtccgctccggtccagtctgctcctatccctgctcctgctgccttcggcttcggtgtg
atggcggagcagcgtcagtttaggactcagtttgtgtgtagtgtcgtggcgtctcacgtc
agccaccagccctccaccagtctcagcttcgtctggattgctcctccgcccagcaccggc
tgtgtcaacttcctggcaactgctacacatcgaggacagatcatcttcaaggacgctctt
gcccagcagctgtgtgagcagggagcacctacggaatcgccattgagacccagtcttgct
gagatccatgggaaccatgcggtgctccgtgatgactttgactccaacctgcagggagag
ctggaccccagcatttggtcagagtgtagtaactgtgaggtaggacagcagtgtggggtt
ctgatgcatggcagagctgtcaccttctgtgagcccttcagagagagagaactgaccact
gtacctctcaacaccaccacagcctctgtcctgcagtttgctctcggttcaggcacatgt
aggttcagttactccgaccccagcatcatcgtggcgttcagtctgaacaagaacaacggc
tccaatgactggatcaccctggagaagatcagagctccaattaacagcagtacagtagtc
cacctcctgcccctgccagtgcactccaggggatatggagtgcgtgtacgctggtcccag
gaggccccccagggacccgagggctacgagtcatgctggggcctggacaacgtactcctg
gtcaatgctgcttacagaccccccctactggaagataatctggaccccccagacacagcc
aactggctcttcttccctggggctaccgtcaagcgtgcctgtcagtcagagggcaacacc
ctgtatttccatggcaacaatgaggagggggtgggccacaccttcgcctccaccagagac
attgacctccaccgagaggagggtcggagctactgggaggaggactttgagagtctgccc
accaactgggacatcgagggggctgtgtatgggacccattgtggggagatagagtcaggc
atggccctggtgtttgagagggatggagagaggaagatgtgtactccctacctggatacc
acctccttcggaaaccttcggttctacttcaccatgggtggtggggagtgtgacccagga
gagtcccatgagaatgatgtcatcttgtttgggaggtcagaggggagacgagaccttgtg
ctgttggataccctgccatactcctcttataggactccgtcagtagtgtcagtatccctg
cccacagacctccagacccccatcacccagttctgcctggagcagcgggcacatggcggt
gccaaccgtcacgtctgggcagtagacttcatgcagctgctgcctgtccttcctggcaca
catacccatgtagcacagttctccatcaacctgggctgtgggtcctaccagcctgccaac
agtgtgaatctggagttttccaccaatcacggtcgttcctggtcgctgctccactcagag
tgtcttccagatttgtgtgctggcccccacctaccacacagcaccatctactcctcagac
aactacagcggctggactaggatctccatcccactgcccaacgctgccttgactgagacc
acacagttccgctggagacagagtagcatgggtgctggcaacatgtgggccatagacaat
gtgtacattggtccatcctgccttcgtttctgctctggcagaggacactgctcccgcacc
ggctgcaagtgtgacccagggtttagtggtccagcgtgtgagctggcatcccagacattc
tctgccttcctgtctgagggcttctcctcccccagactctcctcctaccacagtttctcc
tccctgaggggagcggaggtgagtttcggctgtggggttctggccagtggcaaggctttg
gtcttcaacagggacagcagacgacacctggtgaccgcaccgctcgacagctctcaggcc
aggtacctccagttcactttgcgtctgggaagtcgtagcatcctgagctcctgtcctgcc
cctgaccaaccaggagaaggtgtgttgctgcacttctcctcagacaatggtattacctgg
accctgctgcaacactacgcatataagggcttccacgaacccaggattgtatcagtggag
ctcccccccggtgcccgtaaatttggggtgcagttccgttggtggcagccgtaccactct
gggcgtgggcatgacgtttgggcagtggatgagatcactatgacctctgtgttgttcaac
accataagtctggacttcagcaatgtacttgacgtcactcagagtctgggcttctacctg
gggcacgtccaaccctactgccagcatgactggacactcagtttctcaggcgagcccaac
ccaggctccagtatccgttatgtggagacccagtccatgcagattggagcctcctacaca
ctgcagttctcattggtcatgggctgcggccgagacccctccccccacatcgacacacag
gtccgcctggagttctccaccaatcatggcctgacctggcacctggtcaaagaggcctgc
ctaccagggatgcccagctgttcagagttcactgctcccagtgtgtaccatccctctgag
ttcactgactggagacgcatcactctgccactacctcatagagcatggtccagtgccacg
cggttccgttggatccagaactactatggagagcaggatgaatgggctctggacgacatc
tacattggacagcagtgccttcagatgtgccacggacacggatggtgcgaccatggacac
tgcaggtgtgatgaaggtttctcaggtccagactgccaggcatcctctcctctttcttct
agcatcctgtcagactttgagtcccaagatggtctgctggccatgtggcaggaggtgatt
ggtggagaggtggtaacacctgacatgggctgtggggtggtctcctctgggtcctcgctc
tacttcagcaaggccggattgaggcagctggtgagctatgacctggacacagagtgggca
gagtttgtgcagttctatctgcgtgtgggcggagactgggtacaatgtaacatggcagac
agcagggaggaaggagtgctactgcagtacagtaatgacggaggaatcagctggggactc
atcgctgagatgtacttcaccgacttcatcaagccacggtttgtccactatgagttgcca
caggcctccaagaccccgtgtacccggttcagatggtggcagccccttcactctggggac
ggctacgaccagtgggccattgatgatgtcatcatcttgtcagagagagagaaacacatc
atccccatggccaaccccactatgccacagaacttctatgagaagccggcgtttgactac
cctctgaaccagatgagtgtgtggctcatgctgggcaatgagggtatggaaaaggagagg
aacggcagcttctgtgctcccaccccctctgccatggtgttcgggcgatctgacggagac
agggtggcagtgaccagagacctggtcctaagaccagggtacacactgcagtttaagttg
aacatcggttgcgagtctcagttcagtgcgtcggcctcagtcctgctgcagtactcccat
gatgctggccgtacctgggcgctggtgaaggagggctgttacctaggctcctctggggcg
ggcggctgtgagggcagtgggcgggagctcagggaacccactgtctatgccacgggagac
tacgaaagctggaccagggttaccattgtcattccgcgtaacgtggccgccagtaaaacg
aggttccggtggttccaggagagtagtgtgtacagggacgctccagcctttgccctagat
ggagtctatatctctgagccctgccccaaccactgtggaggacacggagactgcatctct
ggggtctgcttttgtgacatgggatacacagttgagcaggacagctgcgtgccagcggtg
gccagccccacagagctggcagagggctttgagagcaagctgagcccggtttggcagacc
ctgagtggggggcaggtcggagggggctgtggcaccatcagcgagggaaaggctctgtac
ttcagcagctctgggaagagagaggcacgcactgtacctatggatacgacgaacacacgg
cttgtccagttctacatccgaattggagggaagaatgttggacccacctgcaccagacct
cgctcccgcaacgaaggagtgatagtccagttctccaccaacaacggggttcggtggcag
ttcctacgtgagctggactttggttccttcctggattcccaggtggtcaccatcgagctg
cctccacccgccaagactccctacactgtgttccgctggtggcagccacagcagggtaaa
cactcagcccagtgggctctggatgatgttctgattggtatgaatgacagctccaggact
ggcttccatgataagtttgacgggacgtctcctctgagacacaactggtaccgcatacag
gggggagagatcactgtagactgtctgtctctggacacagctctgtccttcaacagcaac
accactgacaagaagccgcggtatgcagaaagctgggactttgaggtgtcaggctcctcc
ttcctgcagtttgaactgtctatgggctgcagtaaggtcaccacctcatcccacggtgtc
aggctggagtactccacagactgtgggcgccactgggccctgctcaccccagagtgtgtt
ccacctgccatcggctgtgccggctacaccatgagctcagtctacaccgctacacagtac
aaccgctggaggagggttacggtgtacctgcccagcgctgccaattctcccaggactcgg
ttcaggtggatccagccccacttcctccctggggcagacggttgggccttggacaatgtg
ctgctggcccctggctgcccctggatgtgctctggacacggactctgtgacaacggatgc
tgtttgtgtgaccggggttatggcggggcccactgcgtgcccttgacccccctcccctcc
attctgagagacgacttcaacgagaacctggcggcggagcagtggcccgaggtgtacggg
gctgagagggggactctcagtggagagcccctcaaatctggcaccgcactaatcttcaaa
ggggaaggtctgcgtatgttggtgtctagggacatggactgcaccagcactgtctacatc
cagttctccttcaagttcatcactaagggtgtcccagagcgctcccacttggtgctacta
cagtactctgtgaacggggggatcagttggctgttgttagatgagttttacttccctacc
tccaccgatacgctgttcatccaccttcctctgcccaccagtgcccagaccaatgctacc
cgcttcaggctctggcagccctacaacagcggtaaaaaagaggaggtgtgggtgattgat
gacctgatcatcgatggcagctcgctcaacaacactcctgtagtctctgaaagctttgag
ggcggaccccaggattacaactggctcttctacccaggaggcaacactggactctactgc
ccctaccagaagagtggcctggaggatgatgagtctgccatggtgtttgtctccagtgag
ttgggagaacattccattaccaccagagacattgatgtcaatgaaaacaccatcatacag
tttgagatcaacgtgggatgcacggcagattcttcctcctctaatccagtgagactggag
ttctccagggactttggggctacatggcatctcctggtgcccctgtgttcagggggcccc
cagccctcatcccaatgctccacagagctgcaccccgccagcgtctactaccccgggaca
acacagggctggaggagggagatcatccacttcggcaagctcagactctgcggatccatc
cggttccgttggtaccagggcttctactccagcggttcatccccccctacctgggctttg
gacagtgtatacattggcccccagtgccaggacatgtgtaacggacacgggtcatgtgtg
aggggtacacactgtgtgtgtgactcgggatactcaggaccagactgctcccaacccgac
acatccaaccctgacttcctcaaggaagactttgaaggaggggcggtggatactgaccgg
tttaggctgctgagtggagggaaacctagcaggaaatgtggtatcatgtccagtgggaac
cacctgttcttcagcgaggacggccttcgcatgctggtcaccaacgacatggacctttcc
aacgcaaggtttattcagttcttcctgcgtctgggctgtggtaaggcctccccagacccc
cgctcccagcctgtcctgctccagttctctgtagacggggctctgacctggggcctgctg
caggacttcttcttctccaacagcagtaaccaggctcgcttcgtagccctggagatccct
ctgcgtgcccgtacctccgccacgcgcctacgctggtggcagccctctgagaatggacac
ttctacagtccatgggttattgaccaggtggtggtgggtggcagtgccagtggctggggt
cctttagaagatgacttctcctctatggatgggcgttcctggctgctccaccccgggggt
acccgcatgcccgtgtgtggttctgacggggcggccttcgctttcatagagaagtccaac
acgcgctacgctgtcaccacagacatcagcctgggacaggatgctttcatacagtttgat
ttctcagcttcatgctctgtcacaaactcttgctacggtgagccacaaaatatatacatt
tga
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