Salmo salar (Atlantic salmon): 106573053
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Entry
106573053 CDS
T04363
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1-A-like
KO
K08543
testicular receptor 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106573053
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106573053
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106573053
Nuclear receptors [BR:
sasa03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
106573053
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106573053
NCBI-ProteinID:
XP_014003166
UniProt:
A0A1S3MK02
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Position
ssa16:complement(3212317..3244661)
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AA seq
625 aa
AA seq
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MDGQTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTA
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLAGQQIQYFQFVTEGSDQALSKPVV
EYCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRL
QRCMILGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETA
RYYKETARSTSLLESSMLLNIQQPFPKLENTILLPTSPESNDPCQGDLSTLANVVTSLAH
LNKAREMNDITDGNDLMGVDDTLSNGDGSMTDLQGDEQTASDITRAFDTLAKALNPGDGS
AGDSLEATLQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLL
FLSMHWARSIPAFQALGGLDNDINLMKACWNELFALGLAQCANVMNVATILAAIINHLQT
SLQEGTGEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDSYEYAYLKAIVLFSPDHPGIDN
TLQIERFQEKAYMELQDYVTRTYPEDSYRISKLLLRLPALRLMSAAVTEELFFAGLIGNV
QIDSIIPYILKMESTDYNSQVATGV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggacggacagactcagaggattcagctggtgtcagctgatggtggcatgatgggacac
cgtatccagattgtgacagaccagtccacgggccagaagatccagatcgtcactgcattg
gagcagggttctggtgggaagcagcagtttatcctggctaacgcagactactccacggca
ggcaaggtaatcctagccaaacaagaggcctcgtcccctggcaaggtgatcctggcggcc
cctgacggttcaggggtcaaccagctgctgtttgcctcccctgacctggctggccagcag
atccagtatttccagtttgtgacggaagggtcagaccaggccctttccaagcccgtggtg
gagtactgtgtggtgtgtggagacaaggcctcaggtcgtcactatggggcagtgagctgt
gagggctgtaagggtttcttcaagcgcagcatcaggaagaacctggtttatacatgcagg
gggtccggagagtgtgtcatcaacaagcaccacaggaaccgctgccagtactgcagactt
cagcgctgcatgatcctgggaatgaaacaggactccgttcagtgtgagaggaagccggtg
gaggtatccagagagaagtctatcaattgtgctgcgtctacggagaagatctacatcagg
aagaacctgtgtagtcctctggctgccacgcccaccttcgtcaccgacaaggaaaccgcc
aggtactacaaggagacagccagatcaactagtttgctggagtcgagcatgctcctcaac
atccagcagccgttccccaagctggagaacaccatcctgctcccgacatcccctgaatcg
aatgacccatgtcagggtgacctgagcacgctggccaacgtggtgacatcactggctcac
ctgaacaaggcccgggagatgaacgacattacagacggcaatgacctaatgggtgtggat
gacacccttagcaacggagacggctcaatgacggatctccaaggagacgaacagaccgcc
agtgacattacgcgagcatttgacaccctggctaaggccttgaatcctggtgatggctca
gcgggagactctctggaggccacgttgcagttgatgtcaggggaccagtcgggccctgta
gtggagctggaggggccccttctctcagacagccatgtccctttcaagttgatgatgcct
ttgcccatgcctgagtacctaaacgtgaactacatctgtgagtcggcctcaaggctcctc
ttcctgtccatgcactgggcgcgctccatacctgccttccaagccttgggtggtctcgat
aatgacattaacctgatgaaggcttgttggaacgagctgtttgctctgggcctggctcag
tgcgccaacgttatgaatgtcgccaccatcctggctgccatcatcaaccacctgcaaacc
agcctacaagaaggtacaggagagaagctgtccccagagcgagtgaagctggtgatggaa
cacatctggaggatgcaggagttctgtaacagcatggccaaactgtcccctgactcgtat
gaatacgcctacctcaaagccatcgtcctctttagccctgaccacccaggcattgacaac
accttacagatcgagcggttccaggagaaggcttacatggagctacaggactatgttacc
aggacctacccagaagactcctatcggatatccaagctgctgctgcgtctcccagccctg
cggctgatgagtgcagcggtgacagaggagctgttcttcgctggcctcatcggcaatgtg
cagatagacagcatcatcccttacatcctcaagatggagtccaccgactacaacagccag
gtggccactggagtctga
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