Salmo salar (Atlantic salmon): 106573125
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Entry
106573125 CDS
T04363
Symbol
nup160
Name
(RefSeq) nucleoporin 160
KO
K14303
nuclear pore complex protein Nup160
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106573125 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106573125 (nup160)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106573125 (nup160)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106573125 (nup160)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106573125 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
RMD1-3
Motif
Other DBs
NCBI-GeneID:
106573125
NCBI-ProteinID:
XP_014003319
UniProt:
A0A1S3MJQ4
LinkDB
All DBs
Position
ssa16:8973268..8997235
Genome browser
AA seq
1391 aa
AA seq
DB search
MAAVLERSFIEICGFERETLPRFREITVNPGLNALPGGVKYPDSAGGFHYEESGKLLSIT
SNRCIHWSTSGDTVQLVEQSLDTNLLNNAVKLKITHCPLLPGGVHIQETLNNVIILIVTN
QTVHRLVLPHPTRMYRSELVTELQMQSIFTDVGKLSLQDPAHSAVIPSPVGQTAGPTASA
AWLSHQGEAHYALASPAGGILVITLPPHDTQGSMTVLELKRSSVMQRLAGWMPTAIRGEQ
SPGDLALSLAVRELEDDTFIFALCQDHKLRMWSFRDQVCLMETDMLEYMPACRGVKGSPG
QGHRLRLAFSPSTGLCLAVYLAVPSRGQFTVLQLVATDNNRYSLDHISSLFATQETLVDF
ALTSTDIWGLWLDDTNQTVVKYINFEHSTAGQWNQVFVQPAPEEEVHIGADQDPRETYLD
MLFSPLRFTASAIVKALQIYRRGTERIADLPWETLKKEVTVAVENELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEALATPLGLLLNPHTHMVCLLKKGFVSFLLPCFAVDHLYL
SFDEYLFSEEETPVTEDPEVSRDVLQLVQCLRLVSDAVPGDMAYEMEKALEHLQSPERAA
EMVLENLLANDNENVIEDIQNKLQDIRNPVSAMAALIREMDLETDSEPGGEGPLTTAGLS
VRISLSQLYGSSVAVAVICQAVCQMAMTRVLFCRDLLILQQLYLRLGDNVFLAGGDQLLQ
LQQDLIPRSSHLLSSYYLLKQISQSLATAVPLDIIDANLQHLSVLELSDSPALASNRSVL
SPQTVVELFYQSVARKAIITQIYSQQQSTALLHWPQMVSSVVTLLAQQLWPNNPGFQFPE
CLMGNCQYTQLQEYVRLIGPWCQVNVGSCRFMLGQCYLANGEGQKALQCFQEAATEVEKE
EFLLRLTGAEEEEVTAASRLQYYNKVLRLLEDVGLPELVIHLATLAITEAVNDPRSQAAL
WTRIFKHHLDLGHNSQAYEALTQNPDSSRQLDCLRQLVVVLCERSQLQDLVQFSYVNLHD
EVVSIIESRARAVDLMSHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTQLGLQK
QVNCYLASLNCLRLIRPDYAWIVQPSSGAVYERPGASPKRNYDGEFATGPVSGQIDILEL
KDLQKEYALARSRLNLAQHHPPSAAIAGSASAVEMVSLLVQTGLFDCALSLCQTFKLSLT
PIFEGLAFKCIKLQYGGEESQNEAWNWLAANQLSTIVTTKESSATDEAWRLLASYLEKHP
TQNAQHHRCVINKLLSHGVPLPDWMVNTYKGVDAAALLRLYLNYDLLEAAAELVLEYVDA
LLGKGHQYFGIERPLSATASLVWLPYTSIDQLLQALNETQTNASIYNKLQDKLNDYHKLV
DQTTRRRLQAQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcttggaaaggagttttatagagatatgtggatttgagagggaaacccta
ccaagattccgggagataactgtaaaccccggtctgaatgctcttcctggcggtgtaaaa
tacccagacagcgcaggaggctttcattatgaggagagtggaaaactcctgtccatcact
agcaacagatgcatacactggtccacctctggggacacagttcagctggtggagcagtct
ctggacaccaacctactgaacaatgctgttaaactcaagatcacacactgccccctgctg
cctggaggtgtacacatccaggagactctcaacaatgtcatcatcctcattgtcaccaat
cagaccgtgcaccggctggtgctgccacaccccacacgcatgtaccgcagcgaactggtg
acagagctccagatgcagtctatcttcacagacgtggggaagctgagtcttcaagaccca
gcccacagcgcggtgatccccagccccgtaggccagacagcaggccccaccgcctcagca
gcctggctcagccaccagggagaggcccactatgccctggcttcacctgctgggggcatc
ctggtcatcacactgcccccacatgacacacagggtagcatgaccgttctggagctgaag
aggagctctgtaatgcagagactcgctggctggatgccaactgcaatcagaggtgagcag
agtcctggggacttggccctgagtctggcagtaagggaactggaggacgacaccttcatc
ttcgctctgtgtcaggaccataaactacgcatgtggtcctttagggaccaggtgtgtctg
atggagactgacatgttggagtacatgccagcgtgccgcggtgtgaagggttccccaggg
cagggccatcggctgcggctagccttctccccctctacggggctgtgtctggccgtatac
ctggccgtaccttccaggggacagttcactgttctgcagctagtggcaacggacaacaac
cgctacagcctggaccacatctcctcgcttttcgccacacaggagacactggtggacttt
gctctgacctccacggacatctggggactgtggctggacgataccaaccagaccgtggtg
aaatacatcaactttgaacattccacggcaggtcagtggaaccaggtttttgtgcagcct
gcccctgaggaggaggtccacatcggagcagaccaggaccccagggagacctacctggac
atgctattctcccccctgagattcactgcctctgctatagtcaaagccttacagatttac
aggagaggcacagagcgaatcgctgacctcccctgggagaccctcaagaaagaagtgacg
gtggctgtggagaacgagctgcagagcagtgtgacagagtttgagtttagccaggaggag
tacaggcagctgcaagtggagttctggtctaaattctatgcctgctgtctgcagtaccag
gaggctctggccactccgctcggcctactgctcaacccacacacacacatggtctgtttg
ctcaagaagggctttgtgtcgttcctgctgccctgctttgctgtggaccacctgtacctg
tcctttgatgagtacctgttctcagaggaggagacgcctgtcactgaagacccagaagtt
agtcgtgacgtgctgcagctggtgcagtgtctgaggctggtgagtgacgcggtgccgggg
gacatggcctatgagatggagaaggccctggaacatttacagtcacctgagagggctgca
gagatggtgctggagaacctactggccaatgacaatgagaacgtgatcgaggacattcag
aacaagctgcaggacatccgtaacccggtgtcggccatggctgcgctgatcagagagatg
gacctggagacggactccgagccaggaggagagggacctctcaccacagcaggcctgtcg
gtgcgtatcagtctgtcccaactgtatggcagcagtgtggcggtggctgttatctgtcag
gctgtctgccagatggccatgaccagagtcctgttctgtagggacctactcatactgcag
cagctctacctacgcctcggagacaatgtgttcctggctggaggggatcagctgctccag
ctacaacaggacctgatcccccgctcctctcacctgctctcctcctactatctcctcaaa
caaatcagccagagcctggccactgccgtgcccctcgacatcatagatgccaacctgcag
cacctgtcagtcttagagctgtctgattctccagccctggccagcaacagatcagtgttg
agccctcagacagttgtggagctgttctaccagagcgtagcgcggaaggccatcatcacc
cagatctactcccagcagcagagcacggccctactccactggccccaaatggtctccagc
gtggtcaccctgctggctcagcaactttggcctaacaatccaggcttccagttccctgaa
tgtctgatgggcaactgccagtacacacaactgcaggagtatgtgcgtctcattgggccc
tggtgtcaggtgaacgtgggctcctgccgcttcatgctgggccagtgttacctggccaac
ggagagggacagaaggcactgcagtgttttcaggaggcagcgacagaggtggagaaggag
gagtttctgctgagattgacaggagctgaggaggaggaggtcacagccgcctcaagacta
cagtactacaacaaggtgttgcggttactggaggatgttggtctaccagagctggtcatc
catctagccactctggccataacggaggctgtcaacgaccccaggagtcaggctgccctg
tggacccgcatcttcaagcaccacctggacctgggacacaacagccaagcctacgaagcc
ctcacacagaaccctgactccagcaggcagttggactgtctgcgtcagctggtagtggtt
ctttgtgaacgctctcaacttcaggacctggtccagttctcctacgtcaacctgcacgac
gaggtggtcagcatcattgagtccagagccagagcagtggacctgatgtctcacaactac
tacgagctgctctacgccttccacatcaacagacacaactacaggaaagcgggtacagtg
atgtttgagtacggcatgcgtctgggcagggaggtgaggacccagctaggtctccagaaa
caggttaactgttacctggcctccctcaactgtctacgactcatcagacctgattacgca
tggatcgtacagccgtcctctggagcggtgtatgagaggcctggcgcgtcaccgaagagg
aactacgatggagagtttgctactggtccagtgagtggtcagatagacatcctggagctg
aaggaccttcagaaggagtacgccctggctcgtagccgcctcaacttggctcagcaccac
ccgccgtccgctgccatcgcaggcagtgcctctgcagtagagatggtgtccctgctggtt
caaacaggactgtttgactgtgccctctcactatgccagaccttcaaactgtccctcacg
cccatcttcgaggggctcgccttcaagtgtataaagttacagtatggtggagaggagagt
cagaatgaagcctggaactggctggctgccaatcagctgtctaccatcgtcacaactaaa
gagtcaagtgccacagatgaggcatggcgcctgctggcctcctacctggagaagcaccct
acacagaatgctcagcaccatcgctgtgtcatcaacaagctgctgtcacacggtgtaccg
ctgcccgactggatggtcaacacctacaagggcgtggacgctgcagcgttgttacggctc
tacctgaactatgacctgctggaggcagcagctgagctggtgttggagtacgtagacgct
ctcctggggaagggacaccagtacttcggcattgagaggcccctctctgctacagcatca
ttggtgtggctcccatacacttccatcgaccagctccttcaggcgctcaacgagacccag
actaacgcaagtatatacaacaaactgcaggacaagctgaatgactaccacaaactggtg
gaccagacgacaaggcgaaggctccaggcccagtag
DBGET
integrated database retrieval system
