Salmo salar (Atlantic salmon): 106573130
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Entry
106573130 CDS
T04363
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106573130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106573130
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106573130
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
106573130
NCBI-ProteinID:
XP_014003327
UniProt:
A0A1S3MJG6
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All DBs
Position
ssa16:9114869..9136730
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AA seq
673 aa
AA seq
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MAADTPPKVLFEHEGVFIHSNEDGEEPDLLVSGFLRLIDKDGETIVEYKPLEDSVDPSNM
LCAGKDSSSVMEWAQCPGEERSTPQQAVVEQQQSYETEWDMINAVSFPKRKPCSNGEGAL
NHTHEKSKWAFTFSVWDLRSITVKEKGSSRLMFRLKEPPTSLPVLHFHQGGSEDFLDCLR
RYALITEAPDDETCLLVSTPNRALSQSFENLLDDNNYGLVTKLKNDPYVTTLGGFSKVTN
YIFDAFRGSELEQQQRPPEEMADLDILGLGEVIPGLEINQQEEPGFEVITRIDLGARPEV
TRRQPLSAEDWAEHQEKGGRMKNVPHLKKIIFKGGLCHAVRKEAWKFLLGYYPWDSTYEE
RKGLQRRKTDEYFRMKLQWKSVSEEQERRNSRLRDFRSLIEKDVNRTDRTNRFYEGMDNP
GLVLLHDILMTYCMYDFDLGYVQGMSDLLSPILYVMENEVDAFWCFVSFMDHMHQNFEEQ
MQGMKTQLIQLSTLLRLLDLAFWNYLESQDSGYLYFCFRWLLIRFKRELSYPDVLRMWEV
MWTGLPCQNFHLLVCCAILDSEKRKIMEENYGFNEILKHINELSMKLDIEEILHKSEAFC
MQIRSCKDLPHSIIEILGFNTESELPRLQGQEFGTLDSPQSPRPTQRQEVFSNGHNGHYR
EPPQNGCKVTFIS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatactcctcccaaggtgttatttgaacatgaaggtgttttcatacactca
aacgaagacggcgaagagccagatctccttgtttctgggttcctacggctcattgataag
gatggtgaaactatcgtggaatacaaacccttggaggacagtgttgatccatccaacatg
ttgtgtgctggcaaggattccagctcggtgatggagtgggcccagtgtcccggggaggag
aggtcgactcctcagcaggctgtggtagagcagcagcagagctatgagactgagtgggac
atgatcaacgcagtctcctttcctaagaggaaaccctgctccaacggagagggtgcattg
aaccatacgcatgagaaaagcaagtgggccttcaccttcagtgtgtgggacctgaggtct
atcacagtgaaggagaagggctcgtcccgcctgatgttcagactgaaggagccccccacc
tccctgccagtcctccacttccaccaagggggtagtgaagacttcctggactgcttgagg
agatatgccttgatcactgaggccccagatgatgaaacctgcctgctggtcagcactccc
aacagagctctgtctcagtccttcgagaaccttcttgatgacaacaactacggccttgtt
actaagctcaagaatgatccgtacgtgacgaccctggggggcttctccaaggtcaccaac
tacatcttcgatgcgttccgtggctcagagctggagcagcagcagcggcccccggaggag
atggctgacctagacatcctgggactgggagaggtcatccctggcctggagatcaaccag
caggaggagccgggcttcgaggtcatcaccaggatcgacctgggagcaaggccagaggtg
acgaggaggcagccactgtctgcagaggactgggctgagcaccaggagaagggaggaagg
atgaaaaatgtccctcacctcaagaaaataatattcaaagggggcttgtgccatgcggtg
aggaaagaggcctggaagtttctgctggggtattacccctgggacagcacctacgaggag
aggaaaggcctacagaggaggaaaacggatgagtacttcaggatgaagctccagtggaag
tctgtgagtgaggagcaggagaggaggaactccaggttgagagacttcaggagcctgata
gagaaggacgtgaacagaacagaccgaaccaacaggttctatgagggcatggacaaccca
ggcctggtgttactccacgacatcctgatgacgtattgcatgtatgattttgatctgggg
tatgtccagggaatgagtgacctcctctccccgatcctgtatgtgatggagaatgaggtg
gatgccttctggtgttttgtctccttcatggatcatatgcaccagaactttgaggagcag
atgcagggcatgaagacacaactgatccagctcagtactctgttgaggctgctggatctg
gccttctggaactacctcgagtcgcaggattcaggttacctgtatttctgtttccggtgg
ttgctgatccgcttcaagagggagctcagttatccagatgttcttcgtatgtgggaggtc
atgtggactggcttgccctgccaaaacttccatttgctggtgtgctgtgccattctagac
tcagagaaacggaaaatcatggaggaaaactatggcttcaatgagatcctcaagcacatc
aatgaactctcaatgaaactggacattgaagaaatccttcacaaatcagaggctttctgt
atgcagatcagaagttgtaaggatttgcctcattcaataattgagatcctgggattcaac
acagaaagcgaacttcccagattacaagggcaggagtttgggactcttgattctcctcag
tcccccagacccacacagagacaggaggtcttctctaatggtcacaatggacattacaga
gaaccccctcaaaacggctgcaaagtcactttcatatcatag
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