Salmo salar (Atlantic salmon): 106573246
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Entry
106573246 CDS
T04363
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106573246
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106573246
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
106573246
NCBI-ProteinID:
XP_014003618
UniProt:
A0A1S3MK65
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Position
ssa16:complement(10235344..10269058)
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AA seq
1789 aa
AA seq
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MFIFQIATMLSAGACVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSTNSTCGLHRP
EPFCIVSHLQDEKKCFLCDSTDAYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICESCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISLH
PGSRYVVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGS
VGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGA
LSTVCDASGGQCQCRPNVVGRNCDKCAPGTYLFGPSGCRPCDCNPQGSKDAFCHEATGQC
VCIPGAYSRQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPRSGRQFASGCYRGLDSPYQVFCICSPGYRGARCEECA
PGYYGNPHENGGHCQPCQCNNNIDMLDQESCNARTGECLKCLYHTEGQGCHSCKLGYYGD
ALTQNCRKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDSRG
IAEQQCNKANGHCVCVEGVSGPRCDVCTRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGAT
DSVTKYYQQSLAADARANASTSGPGNPVESSAILRKATEDKMNDTREEFHRRQEEHAKRL
DDLAGQLETLDLSELSVKTCGSPADEACVDSQCGGLSCVDSKGNRRCGGEGCDGLVNLAN
NAWQKAKGFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDQSNE
ELRSLIRQIRDFLTQDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIRERVGDLAHVE
TILNQSSDDIQRAESLLEQARRVSKEATEVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETADSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDAES
INKVVEQVKKDLDSELKDKYSTVEDLITQKAGGVADAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtttatatttcaaattgcgaccatgctatccgcaggggcgtgcgtccttgcccaggta
ggcataccggagttcagtgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccaactctccaccaactccacatgcggcctccaccggccc
gagccgttctgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgacgcctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgattgagcgctcggctgactttgggaagaac
tggcaagtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagatccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgctgtctacgacatggtggtccgtggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtccatggccac
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagccaagggacgcaacaccaacgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggtgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgcgaccccagcatctgtgaatca
tgtaactgtgatccggtgggctctctgaatggcgggatctgtgacaggatgactgatgtg
tcgtccggactgatcactggccagtgtcgctgcaaacccaatgtggagggagagcgctgt
gaccagtgccagcaggcccattatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtcacacagactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccagtgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctt
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggccgg
cgctgtgaccaggtggagtcaggcttctacttcatcgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggacagggataggttttgtcaacgttcccgagggggcctacctggag
ttctccattgacaacatcccccactccatggagtacgacgtcctcatccgctacgagcct
cagttaccggaccagtgggaggaggtgttgatgacggtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaccatgcctgatgacgacaaccagatgatatcccttcac
cccggatcacgatacgtggtgctccccagaccagtgtgtttcgaggcagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgttcagtccccatataca
ctcatcgactcgattgtgctgatgccccactgtaagaacctggagatcttcactggttct
gtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccctccacagacatctgccgtaacttcatcttc
agcgtatctgctctgctgcaccagggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacggtgtgtgacgccagcggcgggcagtgtcagtgtcgccccaacgtggtgggc
aggaactgtgacaagtgtgcccctggcacctacctgttcggacccagcggctgcagaccc
tgtgattgcaatccccagggatcgaaggatgcgttctgccacgaggccacaggccagtgt
gtgtgtatccccggggcatacagccgtcagtgtgaccgctgtctgccgggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggccacacagagcagtgcgacccctactcc
ggaaaatgcctgggctgccgagaacagaccaccggacacaactgcgagaggtgtctggat
ggttactatggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggcccagaagcgggcgacagtttgccagtggatgttaccgcggtctggactcccct
taccaggtgttctgtatctgcagccccgggtacagaggtgccaggtgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacggcgggcactgccaaccctgccagtgcaac
aacaacattgacatgctggatcaggagtcctgtaatgccagaacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgtcacagctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggtaccaatccagccacg
tgcccggcggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagtgag
acgggctgcgatgcctgcgactgtgaccccaaccactcatttgggacttcctgcaatgag
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaatgcatgtgactgtgactcgcgaggc
atcgccgagcagcagtgcaacaaggccaacggtcactgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacgtctgcacccgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggctagcggcatcaccggaccctataaacac
accatagataacatggagcagagtgccggggccataagaactatcctggcccagaacccg
gctacacagccactgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaacttgactccctcaaagaggacacccagaagctggatcgcacc
gtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcaccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcctcc
actagtggcccaggcaaccctgtggagagctctgccattttacggaaagccacagaggac
aagatgaacgacactagggaggagttccacaggaggcaggaagaacacgccaagagactg
gacgacttggcaggacaactggagacactggacctatcagaactcagcgtgaagacgtgt
ggcagcccagctgatgaggcgtgtgtggactctcagtgcggggggctgagctgtgtggac
tccaaggggaacaggaggtgtggtggcgaggggtgcgacggtttggtcaacctggccaat
aacgcctggcagaaggccaagggctttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgctgaagaccaacggtaccaagcagcgtgtggaccagagcaacgag
gagctgcgcagcctcatccgacagatcagagacttcctcacacaggatgcagcggacctg
gagagcattgaggcagtggccaacgaggtgctggccatgcagatgcccaccacgccagcc
cagctccaaaccctgacagacgagatcagggagcgagtaggagacctagcccacgtggag
accatccttaaccagagctccgacgacatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacagaggtgagggacacagcagagatggtgaagcaggtt
ctggaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccacc
gacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagcggactcggag
tacaagctgaacaatgccacccagaggctgctgcggttagagcgagacgtcacgctgctc
agagagaagacacttaacacctcactcagctctgaacaaactgaaaaagacgcagagagc
atcaacaaagtggttgagcaggtcaaaaaggacctggactcggagctgaaggataagtac
agcaccgtggaggacctgatcacacagaaggccgggggcgtggccgacgccaagaagagg
gcggagcttctacagcaggaagccaaagacctgctgctacaggccagcgacaagctgcag
ctactgaaagatttagagaagtcgtatgaggacaaccagaagactctggaagacaaggcc
aaccaattggtagatctggagaagtccatcaaagagcttctgcaggagatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa
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integrated database retrieval system