Salmo salar (Atlantic salmon): 106573250
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Entry
106573250 CDS
T04363
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3-like
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04020
Calcium signaling pathway
sasa04148
Efferocytosis
sasa04218
Cellular senescence
sasa04310
Wnt signaling pathway
sasa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106573250
04310 Wnt signaling pathway
106573250
04020 Calcium signaling pathway
106573250
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106573250
09143 Cell growth and death
04218 Cellular senescence
106573250
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106573250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106573250
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
106573250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
106573250
NCBI-ProteinID:
XP_014003624
UniProt:
A0A1S3MKJ4
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Position
ssa16:9961758..9987714
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AA seq
1064 aa
AA seq
DB search
MTTVNCSGNEELDFRLIFGEDVQQQLGPTGPDPGDSTPYCTTQSMVNQPIAQAQDLQQSQ
QHHQAASQQAPLQTYSNYHPSSSYEVHSSRYCPMGHLPKAFDCPSIQITSISHSHQELGT
SQDAVPISGADGGGECGRERSWSRDHLYLPLDPCYRDSSSLNPSPCSSLSSRSWLSDVSS
CESFSHVYDDVEAELNEAAARFTMGSPLASPLASPGCSPQGQAAGGFGVELWQQQYFMNT
HSLSPHQSPRQSPRQSPCHSPRNSVTDENWLNPRPTSRSGSRPTSPCGKRRHSSADVYGQ
GPSPSPSPHQSPCPTPSHSPRGSVTEDTWVVGSPGAMGALLYNLSEVDIPSKTRRTSQQA
HMGLLHGQGDSGLVPEDQGVVLPHLDSPADESGSTLKQDGLFEELFLSVPSHFSWNKPKP
GNTPLFRTSSLPPLDWPLPSQFGQCELKVDVQPRGHHRAHYETEGSRGAVKAASGGHPVV
KLIGYNEKPVNLQIFIGTADDRYLRPHVFYQVHRVTGKTVATACQESVISSTKVLEISLL
PENNMSTSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVAFRVYIPQPSGKVLCLQAAS
IPVECSQRSATDLPQMQSCSPISCLVSGGEEMVITGSNISPESKVIFLEKGPDGRTQWEV
DGKVIRDKSKRSRIVVEIPTYHNTTVSSAVQVQFYVCNGKRRRSQRQNFTYLAGASPHHY
PTASDHAVVAPRVKQELTDSTYLSTCNNLPGLYPTSSKQNSSDGAFSQDRPLYGSSGGHP
VPCGPPSQPAYTPSGSSPLQHSPHLHSYSPSMGYQRISPMHTPDSMPPPRTKPVYQATQH
NVPYSGQASSPMRPGPAALQVIRPQSAQPRPAVSSPHRESVMYQSLIGPDLSIATLQSAR
THTQNATQLQSLKYHCSHSDSDLAALQAEYNLSYHSDKNLPASYSPTPGVAATCSTSPLA
SASSGGPLRHLSPSSAQGLASGIDPQECPPAPHSLFSNDRGRVNIKQEPEEKLPLGSMGL
QEITLDDVNEIIDRDISQLSGGGGAAESNQPEQDTYGWDTVILQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtaaattgtagcggcaatgaggaactggacttcagacttattttcggagag
gacgtgcaacaacagctaggccccacaggtccagaccctggtgacagcacgccatactgt
accacccagtctatggtcaatcagcctattgcccaggcccaagacttacaacagagccag
cagcaccatcaggctgcttctcaacaagctcctctccaaacctatagtaactaccacccc
agctccagctatgaagttcacagttccagatactgtcccatgggacacctccccaaggcg
ttcgactgcccaagcatccagatcacatctatcagtcacagtcaccaagagctgggaacc
agccaggatgccgtgcccatcagcggggcagacggcgggggggagtgcggtcgtgaacgg
tcctggtccagggatcacctctacctacccctggacccctgttacagggactcatcgtcc
ctgaaccccagcccttgcagcagcctgtcctccaggagctggctgtccgatgtgtcctcc
tgcgagtccttctctcacgtttacgacgacgtggaggctgagctgaacgaggcggccgcc
cgattcaccatgggttccccgctggcctctcccctggcctcccctggctgctccccacaa
ggccaggccgcggggggattcggggtagagctgtggcagcagcagtacttcatgaacacc
cactccctctcgcctcaccagtcccctcgccagtcgccccgtcagtccccctgtcactct
ccgcgcaacagcgtcacagacgagaactggcttaacccgcgccccacctccaggtccggc
tcaaggcccacatcaccttgtgggaagagacgacactccagcgcagacgtctacggacag
ggaccttccccctccccatcccctcatcagtccccctgccccacccccagccactctccc
aggggcagcgtaacagaggacacctgggtggttggaagccctggtgccatgggggccctc
ctgtacaacctctctgaggtagacattccctccaaaaccaggaggacctctcagcaggct
cacatgggtctactgcatggacaaggagactcagggctggtgcccgaagaccaaggagtc
gtgttgcctcacctggactcacctgcagatgagtctgggtctactctaaaacaggatggc
ctttttgaagaactttttctctcggttccctcacacttctcctggaacaaacccaaacct
ggcaacacaccccttttcaggacctcatccctacccccactggactggcccctgcccagc
cagtttggccagtgcgagttgaaggtggatgtgcagccacggggccaccacagggcccac
tacgagacagaggggagtcggggggccgtcaaggctgcctcaggaggacaccctgtagtc
aagctcattggatacaacgagaagccagtcaacctgcagattttcattggaacggcagac
gatcggtacttgagaccacatgtcttctaccaggtgcacagagtaacgggaaagacggtg
gctactgcttgccaggaaagcgtaataagcagtacaaaggttctggaaatctctctcctc
cccgaaaacaatatgtccaccagtattgactgtgcaggcatcctgaagctgaggaactct
gacattgagctcaggaagggggagactgacatcgggaggaagaacacgcgtgtgcgagtg
gcattccgtgtgtatatccctcagcccagcggcaaggtcctgtgtctgcaagctgcctct
attcctgtggagtgctcccagcgctcggccacagaccttccccagatgcagagctgcagt
cccatcagctgcttggtcagtgggggggaggagatggtaattactggctccaacatatcc
cccgagtcaaaggtcatcttcctggagaaaggccctgatggacgcacacagtgggaagtt
gacggaaaagttattagagacaagagtaaaagatccagaatcgtggttgagattcctacc
taccacaacaccactgtgagctctgcagtccaggtgcagttctacgtgtgcaatgggaag
aggagaagaagccaaaggcaaaacttcacatacttggctggtgcttctccacaccattat
cccactgccagtgaccatgcagttgtggctcctcgggtgaagcaggagctcaccgactca
acctatctgtctacttgcaacaatctccctggcctatatccaaccagcagcaagcagaat
tcttctgacggagccttctctcaggacaggcccttgtatggttcctctggtggtcaccct
gtgccttgtggtccgccctcccagccagcatacactccctcaggctcctcgcctcttcag
cactcccctcacctccacagctacagtcccagtatgggataccagcggataagccctatg
catacacctgattcaatgccaccccctcggacaaagcctgtctaccaggccacacaacat
aatgtgccttatagtggccaggccagctctccaatgagacctggtcctgctgcactccag
gtcattcgacctcagtctgcccagcccaggccagctgtctccagccctcatagggaaagt
gtgatgtaccagagcctcattggacctgatctctctatcgccactctccagtctgccaga
acccacacccagaatgcaacccagctgcagtctctaaaataccactgttcccactcagac
tctgacctagcggctctacaggctgagtataatctgagctaccattctgacaaaaacttg
cctgcttcgtattcccccacccctggagtagcagcaacctgctccacctccccgttagca
tcagcctcctctgggggtcccctgaggcacctgtcccccagcagcgctcaagggctggcc
tctggtatcgacccccaggagtgtcccccggcaccccattccctcttctcaaacgacaga
gggagggtgaacatcaagcaggaaccagaggagaagctgcctcttggctccatggggctc
caggagatcacactagatgatgtgaatgagatcatcgatagagacatatctcagctcagt
ggcggtggtggggcagcagagtccaatcaaccagaacaggatacttatggatgggatact
gtgatactccagtga
DBGET
integrated database retrieval system
