Salmo salar (Atlantic salmon): 106573296
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Entry
106573296 CDS
T04363
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106573296
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Other basic domains
RF-X
106573296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
106573296
NCBI-ProteinID:
XP_014003700
UniProt:
A0A1S3MKT6
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Position
ssa16:16134361..16169095
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AA seq
734 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPTSLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEGYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPTAAQSPEYTGATA
TTGAVQSYTWSLTYTVTTSGGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHGFT
GSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCLMG
GAPRLHPTPVAPRWADVSPANSCYTSPPIHSSRYAASGDMYSPLAPRRNSEYEHSQHFPG
FAYINGEATTGWAK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagaacgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccacattcaacaccagct
actctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaagactgggg
accaggggacagtcaaagtaccactactatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtactccaagaagggggcagcgtgggtgaacgagacgggcaagaaggag
gtcaccaagcagacagtggcgtattcaccacgctccaaactggggacactcctgccagac
tttccaaatgtcaaagacctaaatctgcccaccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccccacatgctc
cctgtcctgggctcctccactgtggtcaacattgtgggcgtctgtgactccatcctctat
aaggcaatctctggggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggttatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcatcatccacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagagggctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggctcagcagttcctgctcatgtggtcttgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtactgtacctgctggagtccctgcactgccaggagagggccaacgagctc
atgaggtccatgaaggcagagggcaacacagctgaggaagagatgatgctgacggagacc
acgcccacctccacgtccccagggcccttctccccggccaagtctgtcacctcagtgggg
gtcccagccgccagctcccccactgctgcccagtccccagaatacacaggggccacagcc
accacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacatcaggc
ggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgccccagtgccc
cctccttcctccgcccatcgactgccagtctacgcacacagggatgaacacgggttcact
ggaagctataactacggaagctactccaaccagcacccccactccatccagagccagtac
cccagtctggcccatgaaccgggcatccctgcccccctccactatcccgcctaccaccgc
acttctgcacagtacccactcaacagccagatgtctcggatggagccctgcttgatggga
ggtgctcctcggctgcaccctacgcccgtggccccccggtgggctgatgtctcaccggcc
aacagctgttacaccagtccccctatacactcctctcgctacgccgcctctggagacatg
tactcccccctggcccctcgcaggaactctgagtatgaacactcacaacactttcccggt
tttgcctacatcaacggagaggccaccacaggctgggccaagtag
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