Salmo salar (Atlantic salmon): 106573348
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Entry
106573348 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106573348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106573348
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
NGL family
106573348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
106573348
NCBI-ProteinID:
XP_014003794
UniProt:
A0A1S3ML08
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All DBs
Position
ssa16:complement(19415391..19627876)
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AA seq
645 aa
AA seq
DB search
MLSKMTSSRQQQTMRGPRWNRALSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKVGPTP
SAGSWETVSSTSTTTTTARTPLSTQATEKTFTIPVTDLNDSSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTSGPAMEGHLTLPPLEH
EHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccctttgtttgtgctgctcctagccctccagctcctggcggtggcg
ggcctggtgcgcgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacgcggcgggggctccgtgaggtccccgacggcatctccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacattcgaaacattgagattggggcc
ttcaacggcctggccagtctcaacaccctggagctgtttgacaaccgcctcaccacaatc
cccaatggggccttcgagtacctctccaagctcaaggagctgtggctaaggaacaacccc
atcgagagtattccctcgtatgcgttcaacagggtgccctcgctacggaggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactggtc
aagctggatgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccacctgcagaagctgtggatgatgcatgcccagatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gttccggccaacaccagctgctgcgcccgctgcagttccccagccagccacaagggacgc
tacataggtgagctggaccagaactatttccactgttatgcacctgttattgtggagcca
ccagcggacctgaacgtgacagagggtatggctgcagagctgaagtgcagggccagttct
ctgacctcagtcagttggattacgcccaatggctccatcatgacccacggtgcgtacaag
atccgcatttctgtgctcaacgacggcacgctgaacttcaccaatgtcaccatgcaggac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtgtcttccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaaggtgggccccaccccc
tccgccggatcctgggagactgtgtcgtccacctccaccaccaccacaacggcccggacg
cccctctccacccaggccacagagaagacctttactatccctgtcacggacctgaacgac
agctccatgaccggcctggatgaggtgatgaagaccaccaagatcatcatcggctgcttc
gtggccatcaccctcatggccgccgttatgctaatcatcttctacaagatgaggaagcag
caccaccagcagaaccaccatgcgccacagcgcaccatcgagatcatcaacgtagacgag
gactgtgtgacaagcgggccggccatggagggccacctgactctgcccccgctggagcat
gagcacctgaatcactacaacacctataagtctgcgtacaaccacgtctccactatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagttcgaaagacaatgta
caagagacccagatctaa
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