Salmo salar (Atlantic salmon): 106573581
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Entry
106573581 CDS
T04363
Name
(RefSeq) protein strawberry notch homolog 2-like
KO
K26273
protein strawberry notch
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106573581
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106573581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
106573581
NCBI-ProteinID:
XP_014004215
UniProt:
A0A1S3MM99
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All DBs
Position
ssa16:38751436..38851686
Genome browser
AA seq
1658 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWGSFSQQSGGYSAHC
PMQSGNQQYHLNAPMPDMHMDMFSHSGFHDDFLNLPRNGDFPQDLSCIDDLSNSLFSSPA
DSLSEYADAQAFIPTDNLAHVPTIWDINTPAQSQLELNVNRFQGLNSLEDISAIISTPPL
GGYQAQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVP
PPDITYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRT
VAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDL
QHNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADELCLV
SRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLD
ENDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLG
GVINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIAD
LGKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKE
KDRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRS
NQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTK
ALDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSI
TKFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQET
FMTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQ
GRGRNFIVYKPNIGKQAHPESLDNLQLRYHKVTPDQAKDSWESQFNFSFGKCSHANWNGK
CKKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQV
GIKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQRLAEERQLQNQHLLAKLYSQRQ
TLNHSFKNQNLSQSLSQGLKTQRLSLAQANPLQVTPLLQPKLSQLKPQLGPVNKLPSMAS
PTSHFSNFPHHFPSLPLLQPDPSSSSKPPRTGEEVLDLTVSPSPSPDSKEKGLVLDCLTR
DGFGLDSLILLSELAAQNTAHKLQQPLQPLPPLTKPQQLQSPQQLQSPQQIQTQLQSPQQ
IQTQLQSPQQIQTQLQSPQQIQTQLQSPQQIQTQLQSPQQIQTQLQSPQQIQTQLQSPQQ
IQTQLQSPQQIQTQLQSPQQILTQLQSPQQIQTQQRLDIPTLINSDHQDYYDILKLLEDP
DHLPYSLSSQTTTNPSSSSNTVAQVSSGLFSSPSTPPSSSLFSSSVLAPSEQQPLPLANG
HCSTDALINVREVLDNMLRTSADRQTVIHYRLPEWDSV
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctggggatcattttcacagcagtctggaggctacagcgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgcccctatgcccgatatgcacatg
gacatgttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagac
ttccctcaggacctgtcctgcatcgatgacctctccaactctctgttctcctctccggcc
gactcgctgtcagagtacgccgatgcccaggccttcatccccacagataacctggcccac
gtgcccacgatatgggacataaacacaccagcacagagccagctggagctgaatgtcaac
aggtttcagggtttgaacagtttggaggatatctctgccattatcagcaccccacctttg
ggaggataccaggctcagagaaaccagactccggcagaagaggaggcagaggaggaggag
gaagagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatcc
accatagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccct
ccacctgacatcacctacactctgtccattcctgactccaccatcaactgtggcctgctc
tctgccctgcagctagaggccatcatctacgcatgccagcaacacgaggtaattctgcag
aacaaccagagagcaggcttcctaataggagacggtgccggagtaggtaagggccgcacg
gtggccggcatcatcctggagaattacctaaagggaaggaagaaggcgctatggttcagt
gtatccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccacc
attcctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagtc
ctgtttgcgacatactctgcactgattggggagagccaagcaggggggcagcaccgcacc
agactcaagcagatcctggactggtgcaagcccggctttgatggagttattgtgtttgac
gaatgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctg
cagcacaacctgccactggccagggtggtttacgccagtgccacaggtgcctctgagcca
aagaacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagacc
tttgacgacttcctgcacgccatcgagaagaggggtgtaggcgccatggagattgttgcc
atggacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtgtcc
ttccgcatcgaggagatcggcctggatgacgacttcaaactggtctacaacaaagctgcc
aaactgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgagctgtgtctggtc
agcaggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctc
tgcatcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggc
aagtgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggat
gagaacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctg
gtacagaaacactttccctcggagaagcagaggagagagaaggcgcgtggaaacaagaga
aaacgtaagcccaggggccggcagcccaaattcccaaagcacaccatggtgcatctgggg
ggcgtgatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgactcc
aactcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacacc
agctgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgac
ctgggaaaggaactacctctgaacactctggatgagctcattgaccagtttggaggacca
gagatggtatcggagatgacgggtcgtaagggtcgcgtggtgcggcgtcctgacggaagc
gtgcgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggag
aaggaccgcttcatgtgtggagagaagatggtggccatcatctcggaggcagccagctcc
ggcatctccctgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacc
ctagagctgccctggagtgcagacagagctatccagcagtttggtcgtacccatcgctct
aaccaggtgacggctccagagtacatcttcctcatctctgagctggccggggaaagacgc
ttcgcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacagg
agagccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaag
gctctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctccc
aaaggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggac
gtgggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatc
accaagttcctcaacaggatcctgggcctagaggtccacaagcagaactctctgttccag
tacttcaccgacaactttgactacctgatcgagaaggacaagaaggagggcaaatacgac
atgggaatcctagatctggccccaggtaatgatgaaatctacgaggagaagcaagagacc
ttcatgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggac
agaggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgag
ggcttctacctctcccacaagttgcgggggaaccacccatgtgtgctgctggcggagcag
ggtcgagggaggaacttcatcgtctacaagcccaacatcggcaagcaggcccacccagag
agcctggataacctgcagctacgctaccacaaggtgactccagaccaagccaaagacagc
tgggagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaag
tgtaagaagattgaggagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccac
atgctgtgtggtgcgctactgcgcgtctggaagtatgtggccgacgtggtctctgacatc
acctgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtc
ggtatcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggac
gaggaggtgaagagaaggcgcaaggagaaggagcagcagcgcgcccaggagcagcggcta
gccgaggagcggcagcttcagaaccaacatctgctggccaagctttacagccagagacag
accctgaaccacagcttcaagaaccagaacttgtcgcagagcctcagccagggcctcaag
acccagcgcctgagcctggcccaggccaatcctctacaggtcacgcctctactccagccc
aaactttcacagctcaaaccccagctcggtccagtcaacaagctccccagcatggccagc
cccacctcccacttctccaatttcccccaccacttcccctccctgcccctcctgcagccc
gacccctcctcctcctccaagccccctcggaccggggaggaggtcttagacctgacggtg
agcccctctccctccccagacagcaaagagaaaggcctggtcctcgactgcctgaccaga
gacggctttggcctggactctctgatattgctgagtgagctcgccgcccagaacactgca
cacaaactgcagcaacctttacagccactgccaccactgacaaagccacagcagctacag
tcgccacagcagctacagtcgccacagcagatacaaacacagctacagtcgccacagcag
atacaaacacagctacagtcgccacagcagatacaaacacagctacagtcgccacagcag
atacaaacacaactacagtcgccacagcagatacaaacacaactacagtcgccacagcag
atacaaacacaactacagtcgccacagcagatacaaacacagctacagtcgccacagcag
atacaaacacaactacagtcgccacagcagatacaaacacagctacagtcgccacagcag
atactaacacagctacagtcgccacagcagatacaaacacagcaacggttggacattccg
actctaatcaacagcgaccaccaggactactatgacatcctcaaactgctggaagatcca
gaccatctgccttactctctgtctagccagacaactactaacccctcctcttcctccaac
acagtggctcaagtctcgtccggcctcttctcttccccctctacccccccctcctcctct
ctcttctcttcttcggtcctggccccctcagaacagcagccactccctctggccaacggc
cactgcagcacggacgccctcatcaatgtgcgcgaagtgctggacaacatgctgcggacc
agcgcagaccggcagacggttatccattaccggctgcctgaatgggactctgtgtaa
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