Salmo salar (Atlantic salmon): 106573720
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Entry
106573720 CDS
T04363
Symbol
nlrc5
Name
(RefSeq) NLR family CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106573720 (nlrc5)
Pattern recognition receptors [BR:
sasa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106573720 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_NXF1-5
Atypical_Card
LRR_8
LRR_14
AAA_30
Motif
Other DBs
NCBI-GeneID:
106573720
NCBI-ProteinID:
XP_014004499
UniProt:
A0A1S3MMZ7
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All DBs
Position
ssa16:31288574..31318355
Genome browser
AA seq
1862 aa
AA seq
DB search
MAMEDVEAEEDVQTVLTQETHELADILSYQDDGFLTRFYEMMDISSRQRLVQLASHRERI
LGLLNYFRTAEPAICRQFLQMVCMLCENMPMLLESRLMSVAGTVTKEVVENNSHTLVDEY
MASQECCLKRPRIDHIESYKAAVRRCLLQRWERVMQGVVKVSLEEAWVSLRHKSLVRPRD
RADRRLSPPELQEGAVEDRVTVDSLLGSEARVTLLLGQAGAGKTLLMHCLGQRWAQDAFP
SFHLLVLLEFRQLNLVARPLSLKELLFRFFLPPEGGEEEGAAVLDFILHNPEKICWIFDG
YDEFHTKITHSGSLRSPFDPQCPLPMAELISGLCSRRILPGCTLLITCRPRDVTDLESSV
DCIGELLGFNWRSVKEYAEQYFQDKDLDLKEKVVTHLLANHHLLTMCYLPALCHTCCVCL
DHIFSRGGSQSQALPQLPTTLTQVYLQILCAFLSRCPGRVTPLLQSHRAEVTQLSCMAMK
GLEDSRIVFLSEEVPPDLLDFVTKAGLLSQVDLTHEDGSKGQGYTFMHLTMQEFMGALHI
MTSKDITEAQLRKKFNLKTRWTTKSDPKTVFTDSLHLYVCGLAAPACSPYLFQLVVGAGA
VRWVKKRQALVLKLLRSLAASTNLTGPKVVELCHCIQETQDAQLAREVVGSRSCFELRNI
TLNPVDLDSLAFVVSSAGVGMGLDFGACSMELECLDILPSCQHIDYLIFRSRKYDDRFAD
KLSSILPRLPTLKRFEFICGSLTDVGAAKLARALESCPQITELNFSDNSLTDRGVGEIAD
LIPKLPSLASILLGKNGCSLEIIYTLLEKMTSCPSIQEVYTDGMKDINVLFFPSSDIKGS
KKNIGLTVSLLNCSLSTDQMTRLCQLLARSPGLTLLDLSGGHMKAGTLKALTDSLQKLNV
SKQIVLNDSHISVDGLMILTSFLSVCPDVVQVDIRLQDPVRVSMFFSRVIEKHKISRRLC
LTGCALRPPHLDRLCENLRDCSALTMLDISNNALENKGLKKLLDLLPQLSNIQEINVSEN
AVSMEGVVQLAGTLCSHRNMSEVNISHGGNKKLILKFLSSKRIQSTGLEQCKKLSLTHSD
IHPTDMNKLCGRLVQCPGLVELDFSHGSLKDDAIENLLKILPKMKSLQLLNMSHVQMSTD
GALLLVKSLIDCQRVRAVELRPQGEAFIKFVNMNAEQATCRLSQYTLSSGDVEKLSGILE
QCPHLSDLDLSSNLLRDEGVKRFVDFLPRLRIASSVNLDDNRLTQVGALYILNTVTTCEK
VVEVEVSLGTEKRSLIRFEQDSDCGKTLSLRECHFGADHLQRLAEILKSCAAQLVKLRLS
CNTMQREGLLALQNSLTTLSSLHTLDIRNNGLNVQVIEDLVKQLRCGHVQRCISIEETWI
TAEAAVNLVSCCLNLNPNIHTIRVNHTTVHITLEKCTNHTPTSGDSADMASSLSTVTISL
VGCAVQGHHLVSLQTVLQRCPLLQDLDLSHNSIGRVGAEFLCSVLPSLVSLRKLCVESKE
ASEDVVLLLAEGLLQAKSIESLNFSGHVISDRGAVVLTRTLQNLPNIRTINLSLCSGWTA
AGALDLVNGLGQCLSLEGISLDSAQLDQESTVSLAQGLHAMTSLKRLNLNRKVTMVTGSP
GEETTLVLLASLEGLRAMEEIELEGMRMSDKGVEELIKHLPTWTGLRKISLSDNYIGDQA
GERLVQVLANCTELEVLHLSRNKLSLACAAKMGQVLPTLTHLRVLDLSENPIGREGSVSI
SNALIFMKYLTKIHLTSIGTSELTGLAASLAYCVCAEDVSFAWNGCGDDVAVKLSEVLPQ
CQKLRRLDLESNSISATGAEALARSLQSCPSLEVIRLWRNSISTSDAQRLRQREKRLNFF
ST
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagatgtagaagcagaggaagatgtccagactgtgttgacacaggagaca
cacgagctagcagacattctgagctatcaagatgatggctttctcaccaggttctatgaa
atgatggacatcagttcgcggcagcggctagtgcaacttgcgagccacagagagcgcatc
ctggggttgttgaattacttcaggactgcagaacctgctatttgtcggcaatttcttcaa
atggtttgcatgctctgcgagaacatgccaatgcttctggaatcacggctgatgtctgtg
gccgggactgtgactaaagaagttgttgaaaacaacagtcataccctggttgatgagtat
atggcatctcaagagtgctgtctgaaacgcccacgaatagaccacatagaaagttacaag
gctgctgtgaggagatgtctactgcagaggtgggagagggtgatgcagggtgtggtgaag
gtttctctggaagaggcctgggtaagtctgcgccacaaatccttggttagaccaagagac
agggctgatcgacggctgagcccaccagagctccaggagggggctgtggaagacagggtg
accgttgactccctcctgggttcagaagcccgggtcacattgctgttgggccaggcaggg
gcagggaagacgctactaatgcactgccttggacagcgctgggctcaggatgccttcccc
tcctttcacctactggtcctgctagagttccggcagctcaatctcgtggctcggccgctg
tctctgaaagagctgctctttcgcttcttcctcccaccagagggtggggaggaggagggt
gctgctgttcttgacttcatcctccacaaccctgagaaaatatgctggatctttgatggc
tacgatgagtttcacactaaaatcacccactcagggagtctgaggagcccattcgaccca
cagtgccctctacccatggcagagctgatatcagggctgtgcagtcgcaggatcctccca
ggatgcaccctattgattacctgcaggcctcgggatgtgacagatttggagagctctgtg
gactgcattggggagctgctaggcttcaattggcgcagtgtgaaagaatatgctgaacag
tacttccaggacaaggatctggatctaaaggagaaggtagtcactcacctactggccaac
catcacctcctcaccatgtgttacctgccagctctctgccatacctgctgtgtgtgcttg
gatcacatattctccagaggtgggtctcagtcccaggctttgccccaactgccaaccacc
ctcacccaggtctacctccagatcctctgtgcctttctgagccgatgcccagggagggtc
acacccttgttgcagagtcacagggcagaggtcacacagctgagctgcatggccatgaag
ggtctggaggacagcaggatcgtgtttctctctgaggaggttccaccagacctgttggac
ttcgtcaccaaggctggtctcctctcacaggtggacctgacccatgaggatgggtctaaa
ggccagggttacacgttcatgcacctcaccatgcaagagtttatgggtgctctacatatc
atgaccagcaaggacatcacagaggcccagcttaggaagaagtttaacctcaagacccgc
tggaccacaaaatcagaccccaagacggtcttcactgattccctccacctctatgtgtgt
gggcttgctgccccagcctgctctccttacctgttccagctggttgtgggagcaggggct
gtgaggtgggtaaagaaacgccaagctctggttctcaaattgctccggagtctggcagcg
agcaccaacctgactgggcccaaggtagtggagctgtgccactgtatccaggagacccag
gatgcacagctggccagggaggtggtggggtcacgatcatgctttgagctaaggaacatc
acgttgaaccctgtagatctggattccctggcctttgttgtatcgtctgctggagtggga
atggggctggactttggagcttgttctatggaactagagtgtctagatattctacccagc
tgccagcacatcgactacctaatttttcgaagccgcaagtatgatgacagatttgcagat
aaactgtctagcatcctccccagactaccaaccctgaaaagatttgagtttatctgtggt
agtctcactgatgtgggagctgccaaacttgccagagccctggagagctgtccacagatc
acagagctcaacttcagtgacaacagcctgaccgacagaggagtcggggagatcgctgac
ctcattccaaagctgcccagtctagcctctatcttgctggggaagaatggctgctctctg
gagattatctacacccttctagagaagatgacttcctgcccctccatccaggaagtctat
actgatggaatgaaggacatcaacgtcctgtttttcccaagctcagacataaaaggttct
aagaaaaacattggactgactgtcagcctattaaactgcagtttgagtactgatcagatg
actagactgtgtcagttgctagcgagaagtcctggcctcactctcctagatctgtcagga
ggccacatgaaggctggtactctcaaggccctgactgactctctacagaagctgaacgtc
tccaaacagattgttctgaatgacagccacatatctgttgatgggctgatgattctgacc
agtttcctgtctgtatgtcctgatgtggttcaagtggacatcaggctgcaagaccctgtt
cgtgtgtccatgtttttttctagggtgatagagaaacacaagatttctaggagactttgt
ctgacgggctgtgctcttcgtccccctcacttggaccgtctgtgtgagaatctgagggac
tgctctgctctgactatgctggatatttccaacaatgctttggaaaacaaaggtctgaag
aagttgttggacctcttgcctcagcttagcaacatacaggaaatcaatgtcagtgagaat
gcagtcagcatggaaggagtggtgcagctagctggaaccctgtgctcacacaggaacatg
agtgaagtgaatatcagtcatggggggaataagaagctgattctgaaattcctctccagt
aaaagaatacaatcaacaggattggaacagtgtaagaaactcagtctaactcacagtgat
atccatcccactgacatgaacaagctgtgtggaagactggtacagtgtcccggcctagtg
gagctagatttctcccatggatccttgaaagacgatgctattgaaaatctattgaagatc
ctgcctaagatgaaatctcttcagttgcttaatatgagccatgtccagatgtctacggat
ggagcattgttattggtcaaatctctgatagactgccaacgtgtcagagctgtggaactc
cggccacaaggagaagccttcatcaagtttgtcaacatgaatgcagaacaagcaacttgc
agactctctcagtacacactgagcagtggggatgtggagaaactctctgggatcctggag
cagtgtcctcatctgtctgacctggatttatccagtaaccttctgagagacgagggagtg
aagagatttgtggattttctgccaaggctgcggattgctagctcagtgaatctcgatgat
aacagactcactcaggtgggggctctctacattctgaacacagtgacgacctgtgaaaaa
gtggttgaagtggaagtcagtttgggaactgagaagaggtcgctcatccgctttgaacag
gacagtgactgtggcaaaactctgagtctgagagagtgtcattttggggctgaccatctg
cagagactagcagagattctgaagagctgtgctgctcagttggtcaaactgaggttatcc
tgtaacaccatgcagagagaaggcctcttggctctacagaacagcctgactaccctgtcc
tcattacacaccctggatataagaaacaacggacttaatgttcaggtgattgaagatttg
gtgaagcagctgaggtgtggtcatgtccaacgctgtatcagtattgaggagacgtggatc
acagcagaagcagctgttaacctggtctcctgctgcttgaacctgaaccccaacatacac
acgatcagggtaaaccacaccactgtacacattactttggaaaaatgcacaaatcacact
cctaccagtggtgattctgcagacatggctagctctctgtctaccgtgaccatcagccta
gtaggctgtgcagtacaagggcaccacctagtgtctctgcagactgtgctccagagatgc
cctctgctgcaggacctagatttgtcacacaacagcatcggtagagtgggagctgagttt
ctctgctctgtcctaccatccttagttagtctgaggaaactctgtgttgaatcaaaagaa
gcatctgaagatgtggtattgctccttgccgaggggttgttgcaggctaaaagcattgag
agcttgaatttttctggtcatgtgatcagtgacagaggagctgtagttctgaccagaaca
ctccagaatctaccaaatatcagaacaatcaatctgtccctgtgctctggttggacagcg
gcaggagcattggacctggtcaacgggcttggacagtgtctctctctggaggggatcagc
cttgactctgcacagctggatcaagagagcacagtctccttggcacaggggctccatgct
atgacctccttgaagaggctaaatctgaataggaaagtaaccatggtgactggatcccca
ggggaggagaccacactggtcctactggcctctctggaggggctcagagcaatggaggag
attgagttggaggggatgaggatgtcagataaaggagtggaggagcttatcaaacacctg
cccacctggacaggcctgaggaagatcagcctgtcagataactatattggtgaccaagca
ggagagaggctggtccaggtcctggctaactgcacagaactggaggtactccatctgtcc
agaaataaactcagccttgcctgtgctgccaagatgggacaagttctgcccactctcact
cacctcagggttctagatctctcagagaacccgattggtagagaaggatctgtcagtatc
tccaatgctctgatcttcatgaagtatttgacaaagatacacttgacctccatagggact
tcagagctcactggtctagctgccagcttggcttactgtgtctgtgcagaggatgtcagt
tttgcgtggaatggttgtggagatgatgtcgcagtgaagctttccgaagttttaccacaa
tgccagaagctaaggagacttgatcttgagtcgaacagcatcagcgctactggagcagag
gcacttgccagaagcttacagtcttgtccgtcgcttgaagtaatcagactgtggaggaat
agtatctctaccagtgatgcccagagactgagacagagggagaagaggctcaacttcttc
tccacatag
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