Salmo salar (Atlantic salmon): 106573783
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Entry
106573783 CDS
T04363
Name
(RefSeq) minor histocompatibility protein HA-1-like
KO
K26415
Rho GTPase-activating protein 45
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106573783
Membrane trafficking [BR:
sasa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106573783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
106573783
NCBI-ProteinID:
XP_014004614
UniProt:
A0A1S3MNB2
LinkDB
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Position
ssa16:38904283..38921529
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AA seq
1102 aa
AA seq
DB search
MMLSTQPLPPLPPPSSLLPQVPYWIPLCPALAPPVPSTASCLAEAAPSPGATMKRPTGLS
RHAGAEGFPIHSRVFTKGQGKGPIAPQDSLESTAIEVEDIPSLLRDVARFAEAVEKLKDV
VLREDKQENRCPVAHECLGEVLRVLRQVISTYPLLNTVETLTAAGKLISKVKGFHYEMCN
DTEKKDFETAIETIAVAFSSNVSELLMGEVDSSTLLSLLPTEKSRSMENLYRASGQGLEG
AQMTGDLQDFGRAEEVDMLLQRSEGGVDSALAYAKTISKCMKDLMSYVEKRTSLKVEFAK
GLQRLYQSSKHSITHHHMPFYSIYSLALEQDAEQSSGVQQATSTLHSQTFLQPLTQRKHE
HEKKRKEIKEQWHRAKRKLLECESNLRKAKHAYMARCEEHDKAATSRAAEEGGSTSKSLG
RKLRVEEEARNKAEEAEATYRMCIADATTQQQELEHVKVNVLRLLQEVIQQSDQTLRSAT
ISYYQIMHMQTVALPVHYQTLCESSKLYDPGQQYAAHVQDLQLTKEPKVNYQFEPYTAAA
ASTQWQQSQAAAMWGIPARPRNDSFNTDQQSSSEGQPSTGETMTDEDRSAENPRKRQGHK
SWGSTVSDADSVGGLESPTTSTSDISKMARTSSTGTMSSNEDPDEKDENVASFQAPKING
MEPEMAVPTRPFRNIGLSKAAQTHQLRKLRTPSKCRECDSYVYFQGAECEECFLACHKRC
LETLAIQCGHKKLQGRLQLFGRDFSQVSSDSSNGIPFIITKCISEIERRALKMKGIYRVN
GVKTRVEKLCQAFENGKELVELSQCPPHDISNVLKLYLRQLPEPIMLFRLYNSLMGLAKE
SLLTEGGEAGTGKGPELVDLGPATDPAILAVVDRLRELLRELPKANIATLRYILRHLRRI
AELEQDNKMSPSNLGIVFGPSLMRPRPTGATVSLSSLVDYPHQARIIETLIVFYTAIFQS
SSSHPFSTQQTVGAGIDKNSSAAVADVEEQDANEEQSRTDSDKMEGCGSSPGSLGSSEQM
VDSDSELDETGRGSTHCPHSLVKLESKVSTEDDQLSCKDSLKLSRPSLPQPVLVPDQESP
GPDALNHDPPDLEECEQELSST
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcgacacaaccccttcctcctctacctccaccctcctcactcctaccccag
gtgccctactggattcctctgtgtcctgccctggcaccaccagtgcccagcacagcaagc
tgtttggcggaggctgccccgtccccaggggctaccatgaagaggccgactggcctcagt
cgtcatgccggcgcagaaggcttccctatccactccagggtgttcaccaagggccagggt
aaggggcccatcgccccccaggacagcctagagagcacagccatcgaggtggaggacatc
ccctctctgctgagggatgtggcccgcttcgctgaggctgtggagaagctgaaggatgtt
gtattgagggaagacaagcaggagaaccgttgccctgtggcccatgagtgcctgggggag
gtcctgagggtcctacgacaggtcatcagcacctaccccctcctcaacactgtggagacc
ctcactgctgcaggcaaactcatatctaaggtcaaaggatttcactatgagatgtgtaat
gacacagaaaagaaggactttgagacggccattgagaccattgcagttgcttttagtagc
aatgtgtcagagctactgatgggggaggtggacagcagtaccctactgtccctgctgcca
acagagaagagcaggtctatggagaacctctacagggcatcaggtcaggggctagaggga
gctcagatgacgggtgacctgcaggactttggccgggccgaggaggtagacatgctgctg
cagcgtagtgaagggggagtggactctgctctggcctacgccaagaccatctctaaatgc
atgaaggacctgatgagctatgtggagaagaggacctcactgaaggtggagtttgcaaag
ggcttacaaagactgtaccagtccagcaaacacagcatcacacaccaccacatgcccttc
tactccatctactctctggctctggagcaggatgcagagcagagcagtggggtgcagcag
gccacctccacactgcacagccagaccttcctacagcctctgacacagcgtaaacatgag
catgagaagaaacgcaaggagatcaaggaacagtggcaccgagccaagaggaaactgctg
gaatgtgagtctaacctgcgcaaggccaagcatgcctacatggctcgctgtgaggagcac
gacaaggcagccactagcagagcagcagaggagggaggctccacctccaagtctctgggc
aggaagttacgagtggaagaagaggctcgcaacaaggctgaggaggcagaggccacctac
aggatgtgtatagcagacgccaccacccagcagcaggagctggaacatgtgaaggtcaat
gtgctccgacttctgcaggaggtcatccaacagagtgaccagaccctgcgctcggctacc
atctcgtactaccagataatgcacatgcagacagtggcgttgccggtccactaccagact
ctgtgtgagagcagtaagctgtatgacccaggacagcagtacgctgcccacgtccaagac
ctgcagctcactaaggaaccaaaggtcaactaccagtttgagccctacaccgccgctgca
gcctccacacaatggcaacaatcacaagcagctgccatgtggggaatcccagctcgaccc
cgtaacgacagcttcaacacagaccagcagagcagctctgagggtcaacccagcaccgga
gagaccatgaccgacgaggaccgcagtgctgaaaatcccagaaagagacaaggccacaaa
tcgtggggttctacagtgagtgatgcagacagtgtaggtggcctggaatctcctaccacc
agtacaagtgacatcagtaaaatggcgcgcacctcctccaccgggaccatgtcatcgaat
gaggatccggatgagaaggacgagaacgtggcttccttccaagcaccaaagataaatggc
atggagccagagatggcggttccaaccagacctttccggaacattgggctctccaaagcc
gcccagacccaccagctgcgtaaactccgcaccccgtccaagtgtcgggagtgcgacagc
tacgtgtacttccagggagcagagtgtgaggagtgtttcctggcatgtcataagcggtgt
ttggagacgttggccatccagtgtggccataaaaaactgcagggtagactccagctgttc
ggccgagacttctcccaggtgtccagcgacagctccaacggcatccccttcatcatcact
aagtgcatctccgagatagagagacgagccctgaagatgaagggtatctacagagtgaat
ggggtgaagactcgtgtggagaagctatgtcaagcctttgagaacggcaaggaactagtg
gagctatcgcagtgtcccccccacgacatcagcaatgtccttaagctctacctccgacag
cttccagagcccatcatgttgtttcgtctgtacaacagcctgatggggctggccaaggag
agcctgctgactgagggaggggaggccgggacagggaaggggccagagctggtggacctg
gggccagccactgacccagcgatcctggctgtggttgatagactcagagagttgctgaga
gaactgcccaaggctaacatagccacgctgcgctacatcttacgccacctgcgcaggatt
gcagagttagagcaggacaataagatgagtcccagtaacctgggcatcgtgtttggcccc
tctctgatgcggccccggcccactggggccacagtgtccctgtcctctctagtggactac
ccccaccaggcccgcatcatagagactctcatagtcttttacacagccatcttccagtcc
tccagcagtcacccattctccacccaacagactgtcggtgcgggtatagataagaacagc
agtgctgcggtcgctgatgttgaggaacaggatgccaatgaggaacagagcagaacagac
tctgacaagatggagggctgtggcagttctccaggctccctgggttccagtgagcaaatg
gtggactctgactcggagctggatgagactgggagggggtccacacactgtccccacagc
ctggtcaaactggagagcaaggtcagcacagaggatgaccaactgagctgcaaggatagc
ctgaaactctccagaccgtctcttcctcagccggtcctggttccagaccaggagagtcct
ggtcccgatgccttgaaccatgaccccccggacctagaggagtgtgagcaggagctgagc
tcaacgtga
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