Salmo salar (Atlantic salmon): 106573894
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Entry
106573894 CDS
T04363
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106573894
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106573894
09144 Cellular community - eukaryotes
04510 Focal adhesion
106573894
09142 Cell motility
04820 Cytoskeleton in muscle cells
106573894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106573894
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106573894
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106573894
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Opsonins
106573894
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106573894
Exosomal proteins of colorectal cancer cells
106573894
Exosomal proteins of bladder cancer cells
106573894
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106573894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
106573894
NCBI-ProteinID:
XP_014004801
UniProt:
A0A1S3MPP7
LinkDB
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Position
ssa16:42922038..42938723
Genome browser
AA seq
747 aa
AA seq
DB search
MLWILVLVISLSVSSDLVAGQRDGEIINQIKGTNQALAEIKELLKQQIQEIVFLKNTVME
CEACGMQGPPRPSCDPNPCHPGVKCIETAGGIKCGSCPEGMVGNSTRCMDVDECVVKPCH
MGVRCINTSPGFRCGPCPTGYTGLQVQGVSLSYATKNKQVCKDINECEGPKNGGCVENSN
CVNTPGSFRCGLCKAGYVGDQRKGCKPERACGNGQPNPCHASGECIVQRDGKIECQCGVG
WAGNGYFCGSDIDIDGFPDEKQECAERNCAKDNCQTVPNSGQEDADKDGIGDACDEDADG
DGILNTQDNCVLVPNVNQRNVDEDDFGDACDNCRMIKNNDQKDTDIDRLGDECDEDIDGD
GIPNNLDNCKRVPNADQKDRDGDKVGDACDSCPYVRNPDQLDMDNDLIGDPCDTNKDSDG
DGHQDSQDNCPAVINSAQLDTDKDGLGDECDNDDDNDGIPDLLPPGPDNCRLIPNPLQED
SDGDGVGNLCENDFDNDTIIDSIDVCPENAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVL
DQGREIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMW
KQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNSLWHTGDTSDQVKLLWKDARNV
GWKDKTSYRWFLQHRPQDGYIRVRFYEGPQLVADTGIIIDTTMRGGRLGVFCFSQENIIW
ANLRYRCNDTIPEDFDTYQSQQVQLQF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggatcctggtgttggtgatttctctcagtgtgagcagtgacctagtagctggt
cagagagatggagaaatcatcaatcagatcaagggaacaaatcaagctctggctgagatc
aaagaactgctgaagcaacagatccaagaaattgtgttcctaaagaacacagtgatggag
tgtgaagcctgtggcatgcaaggtccccctcgcccctcctgtgaccctaacccctgccac
ccgggggtaaagtgcattgaaacagctgggggcatcaagtgtggctcctgccctgagggc
atggtgggcaacagtacccgctgcatggatgtggacgagtgtgtggtgaagccttgccac
atgggtgtgcgctgcataaacacgtccccaggcttccgctgtggcccctgtccaactggc
tacaccggccttcaggtgcagggagtaagcctctcctacgccactaaaaacaaacaggtc
tgcaaggacatcaatgagtgcgaaggacccaagaatggaggttgtgtggaaaattccaat
tgtgtaaacacacctggctcgtttaggtgtggcctctgtaaggcaggctatgttggggat
cagcgcaagggctgtaagcctgagagagcatgtggtaatggccagcccaacccctgccat
gccagcggagagtgtattgtccaacgagatgggaaaatagagtgtcagtgtggggtggga
tgggctggcaatggctacttctgcggatctgatattgacattgatggcttccctgatgag
aaacaggaatgcgccgagaggaactgtgccaaggataactgtcaaacagtacccaactct
ggccaagaggacgcagacaaggatggtataggagacgcctgcgatgaggatgcagatggg
gatggaatcttaaatacacaggacaactgtgtgctggtaccaaatgtcaaccaaagaaat
gtggacgaagacgactttggagacgcctgtgacaactgccgtatgatcaaaaacaacgac
cagaaagacactgatattgatagactgggtgacgaatgtgacgaagacattgatggcgac
ggaatccccaataacctggacaactgcaaaagggttcccaatgctgaccagaaggatcga
gatggggacaaagtcggagatgcctgtgacagttgcccttacgttcgcaaccctgaccag
ttggatatggacaacgacttgatcggagacccttgtgacaccaataaggacagtgatggt
gacggtcaccaggactctcaggacaactgccctgcggtcatcaacagcgcccagctggac
acggacaaagatggcctgggggacgagtgtgacaacgacgatgacaatgatggtattcct
gaccttctgcccccgggaccggacaactgtcgcctcattcccaaccctctgcaggaggac
tctgacggtgatggggttgggaacctgtgcgagaacgactttgacaacgacaccatcatc
gacagcatcgatgtgtgcccggagaatgctgaggtcactctcacagacttcagggcctac
cagacagtggtgctggacccggagggagacgcacagatagaccctaactgggtggtgctc
gatcagggaagagagattgtccaaactatgaacagtgaccctggactggctgttggttac
acggctttcaacggtgttgacttcgaagggacgttccatgtgaatacggtaacagacgac
gactatgcaggcttcatctttggctaccaggactcttcctccttctacgtagtgatgtgg
aaacaggttgagcagatctattggcaagccaatccgttccgagctgtggcagaaccaggg
atacaactgaaggctgtaaagtccaacacgggaccaggggaaaatctacgtaactccctg
tggcacaccggagacaccagtgaccaggtgaagctgctgtggaaagacgcccgtaacgtg
ggctggaaggacaagacctcctaccgctggttcttgcaacacaggccccaagatggatac
atcagggtgcgtttctatgagggtcctcagctagtggcagacacaggcatcatcatagac
accaccatgagaggaggcagactgggcgtcttttgcttctctcaggagaacatcatctgg
gctaacctacgctaccgctgcaatgatacaatccctgaggacttcgacacataccaatcc
caacaggtccagctgcagttctaa
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