Salmo salar (Atlantic salmon): 106573948
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Entry
106573948 CDS
T04363
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106573948 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106573948 (vcam1)
04090 CD molecules [BR:
sasa04090
]
106573948 (vcam1)
04091 Lectins [BR:
sasa04091
]
106573948 (vcam1)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
VCAM
106573948 (vcam1)
CD molecules [BR:
sasa04090
]
Proteins
106573948 (vcam1)
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106573948 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
ICAM1_3_5_D2
ICAM_N
REJ
Ig_C17orf99
Pedibin
Motif
Other DBs
NCBI-GeneID:
106573948
NCBI-ProteinID:
XP_014004900
UniProt:
A0A1S3MP85
LinkDB
All DBs
Position
ssa16:44932850..44944338
Genome browser
AA seq
806 aa
AA seq
DB search
MSLLWILILPVTAFAFHVELKPKSAFFRVGDRQELQCSVKDCNEKVTMSWALLGDKPMFA
KIHTSGSESVAAFDPVMTVHDDILLCKVSCGALTKQQRVVVKVYSFPEAPVISGYDHLLL
GQSNTLTCEVIDAYPAEHLRLEWLRGDSMLQTDAESVVSTYRFMPTPEDKEASITCRASH
DQDGVPDEEKTKETTVSLTVLYAPQNISISEPTAVRVGSSLTLSCHAEGSPRPDTQWKAI
GPDGQAVIVGQSEELVLTEMTLVDSGQYECVVSNTIGNITASVNVLVQAPPTNTTITVSP
ASEVKEGESVTVSCLSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTLSSALLADSALY
QCQAFNEHGSQKVSALLSVEEYPLEVAMDVGVTAEMGSNLVLSCRALGCPQPAFYWRSML
DMAVHSRAHTQDSLSHLHLGPLGLVNEQAYTCEAKCGSVIKAKHAEVKVFSFPSDPIIEN
TGPFLEHGVGTFFCSVADVYPARLLQIQWLDGEIELASEMGQYSSELQNVTSTLSFSVGP
EDQGRQITCRVSLQMDEIPQSGRERQAVTVLELHYAPRGTTITVSPASEVKEGESVTVSC
LSDGAPVGRMVLRRLSEDQDVELQSSNGSSTSFTLSSALLADSALYQCEAFNEHGSQRAS
THITVKAPPRNTTVLIYPSAEVQEGQNVTICCRSVSFPPPAVVLRKLDNGTELYSPDGNF
LLVNLAPNDTGLYQVNVTNDLGYETEIFSINVIEKHSSTSPDWNHIVIPAVCVGIMVTTT
GLVLDYLRRARRKGFYELAKCKPGSA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttatggatattgatactaccagtaacagcctttgcatttcatgtggagcta
aaaccaaagagtgcatttttcagagttggtgataggcaggagctgcaatgttcggtgaag
gattgtaacgaaaaggttactatgtcctgggctttgctgggggataagcccatgtttgct
aaaatacacacctcagggtcggaatccgtggcggcctttgaccctgtgatgacagtacat
gatgacattcttctctgcaaagtcagttgcggagcattgaccaaacaacagcgtgtggtt
gtcaaagtgtactcatttccagaggctcctgtcatatcaggctacgaccatcttctcttg
ggccagtccaacactctgacatgtgaggtgatagacgcttatcccgcggagcacctgcga
cttgagtggctgcgaggagacagcatgctccagacagacgcagagtccgttgtatctacc
tacaggttcatgcccaccccagaggacaaagaggcaagcatcacatgcagagcctctcac
gatcaggatggtgtgcctgatgaagagaagaccaaggaaaccactgtgtctctcacagtg
ctttatgcaccacagaatatatcaatatctgagccgactgctgtgagagttggctccagt
ctcacgttgtcgtgccatgctgaagggagccccagaccagatacacagtggaaggccatt
ggtccagatggacaggctgttattgtggggcagagcgaggagcttgtccttacagagatg
acactggtggattctggtcaatatgagtgtgtggtgagcaacaccattggaaacatcaca
gccagcgtgaacgtccttgttcaagctcccccaaccaacaccaccatcacagtgagccca
gccagtgaggtgaaggaaggggagagcgtgacggtgtcctgcctgtcggacggagctccg
gtgggacgtatggtgctgaggagactctctgaggaccaggatgtagaactccagtccagc
aacggatcctccacctccttcaccctctcctctgccctgctagcagactctgctctctac
cagtgccaggccttcaatgaacacggcagtcagaaagtcagcgccttgctctctgttgaa
gagtatcccctggaggtggcgatggatgtgggggtgacggctgagatgggatccaacctg
gtgctctcctgccgggctttgggctgtccccagccagccttctactggaggagcatgctg
gacatggccgtccatagccgtgcacacacccaggactccctctcccatctccacctgggc
ccacttgggctggtcaacgagcaagcctacacctgtgaggccaagtgtggctctgtcatc
aaggccaagcacgctgaggtcaaggtcttctctttcccctcggaccctatcattgagaac
actggcccctttctggaacacggtgtcggcacctttttttgttcggtagccgacgtctac
ccagccagactcctgcagatccagtggctcgatggggaaatcgagctagcctccgagatg
ggacagtattccagtgaactccagaatgtgacgtcaacgctttctttctcggttggaccg
gaggaccagggcagacagatcacctgcagagtcagtcttcagatggacgaaatccctcag
agtgggagagagaggcaggcggtgactgtactggagctccactatgcccccaggggaacc
accatcacagtgagcccagccagtgaggtgaaggaaggggagagcgtgacggtgtcctgc
ctgtcggacggggctccggtgggacgaatggtgctgaggagactctctgaggaccaggat
gtagaactccagtccagcaacggctcctccacctccttcaccctctcctctgccctgcta
gcagactctgctctctaccagtgcgaggccttcaatgagcacggcagccagcgagctagc
acacacattacagtcaaagcacctcctaggaacacaacagtcctgatatatccatctgct
gaggtgcaggaaggccaaaatgtcaccatctgctgtcgctctgtcagtttccccccacct
gctgtggttttaaggaaactggataatggcacagagctctactccccggatgggaacttc
ctgctggttaaccttgcgcccaatgatacaggcttataccaggtgaatgttaccaatgac
ctgggttacgagaccgagatcttcagcatcaacgtcatagagaagcactccagtacttca
ccagactggaaccacatagtcattcctgctgtctgtgtgggtatcatggtgaccaccacg
ggcctagtcctggactacctgaggagagccaggaggaagggcttctatgagctggccaag
tgtaagcccgggtctgcatag
DBGET
integrated database retrieval system
