Salmo salar (Atlantic salmon): 106574003
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Entry
106574003 CDS
T04363
Name
(RefSeq) multidrug resistance protein 1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106574003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106574003
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106574003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
AAA_21
RsgA_GTPase
AAA_16
AAA_5
AAA_7
AAA_29
AAA_28
AAA_25
Zeta_toxin
ECH_2
Motif
Other DBs
NCBI-GeneID:
106574003
NCBI-ProteinID:
XP_014004978
LinkDB
All DBs
Position
ssa02:complement(3990401..4012853)
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AA seq
1258 aa
AA seq
DB search
MIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQQLNLTANFTVEEISALLNSTDGCIQI
PGVDIEALMTRHAYYFIGIGCAVFLLGTFQVMLFLLTATKQTKRIREKYFHAILHQQMSW
FDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCTFLSGFIIGFIFGWKLTLVILAVS
PLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILVAIRTVVAFNGQKKAVERYENNLE
DAKNFGIKKAITTNVSMGFTQFVIFGTYALAFWYGTKLSVDEPENYTIGKTITVFFSVMI
GSFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDSSSKEGHKPDCVKGDIEFKNIHFS
YPSRKDVKILQGVNLTVPRGKTIALVGASGCGKSTTIQLLQRFYDPDSGEITLDGRDIRT
LNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATDEDIERAVREANAYDFISKLPDKL
NTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEATSALDTQSESVVQAALDKARAGR
TTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMAKKGVYYSLVMQQSQGKPEEDEEG
PVEEDNPPKYEDLDYVLYDSSDMDEMEVVNEEGIENGGFERTSISSGRVEMKPTRRKSKK
SKKDKKKEKKPEEAPDIPFTRILALNKPEWPYMLVGTLSSLVGGAVYPCVAIIFAKIIGV
FSEVDPEVKRQKTMMFSLLFLLIGGVAFVTYFLKGYMFGKSGELLTMRLRRQVFHAMMRQ
EIGWFDDNNNAVGVLTTRLATDASLVKGATGSRLGLATNTVCALTIAIVVAFIHSWQLTL
LILACVPFLIGANVIQMRAMAGHASKDQGALEQSGKISTETVENFKTVVGLIREDVFFHK
FMDSLERPYQNGLVKAPIYGLTFAVAQAIPYMVNAAIFRFGSWLIAHCHTEYENVFLVFS
VIIFAAMNIGESASFAPDFAKAKAAAGRILGLLEKKPEIDIYSEEGEKPTDFVGDIDFRG
IHFAYPTRQNVRVLQGLSLSVGPGQTLALVGESGCGKSTSIQLLERFYSPAEGQVLVDGL
DTKTLNLSWLRSQLGLVSQEPILFDCSISENIQYGDNSREVSQDEIDEAAKNANIHDFIM
GLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKVLLLDEATSALDTESEKIVQQALD
AARQGRTCIVIAHRLSTIQNADQIAVIQYGQVTEQGTHTDLMAKGGAYCALVNAQVNH
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgataatcggcctgctatgtgctgctctccacgggatagccctgccccttatgtgtgtt
gtgtttggacagatgaccgacagctttgtgcaaagtggacaacagctcaacctgacagcc
aatttcactgtggaggagatcagcgctttattgaactcaactgatggatgtattcaaatt
cctggagttgatatagaggctctaatgactcgacatgcctattacttcatcgggatcggt
tgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgctgacagccaccaaa
cagaccaaacggattcgggagaaatacttccatgccatccttcaccaacagatgtcctgg
tttgatacacaccagataggagttctcaacgtcaggttgacagatgacatcaacacaatc
aacgaaggccttggagacaagatctgtgtgtttgtgcagttcttctgcaccttcttgtca
gggttcatcattggtttcatcttcggctggaagctgaccctcgtcatcctggccgtcagt
cctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctgaccagtaag
gagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtggctatcagg
acagttgtggctttcaatgggcagaagaaagctgtggaaaggtatgaaaacaacttggag
gatgctaaaaactttggaataaagaaggccatcaccactaacgtgtccatgggcttcacc
cagtttgtcatatttgggacgtacgccttggctttctggtacgggaccaagctctctgta
gacgagcctgaaaactataccattggaaaaaccattacagtcttcttctcagtgatgatt
gggtcgttctctttgggccagggtgctcctaacttggaagccatcgccaaagcacggggt
gctgcctatgaagtctacaataccattgaccagccgcggcccatagacagcagttcaaag
gaaggtcacaaaccagactgtgtgaaaggagacattgaattcaagaacatccacttcagc
tacccctccaggaaagatgtcaaaattcttcaaggagtgaatctgacagtgcctcgtggg
aagaccatagctctggttggagccagtggatgtgggaagagcaccaccattcagctgctg
cagcgcttttatgatccagactcaggagagattaccctggatggtcgggacatccggacc
ctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacctgtgctattc
ggaacaaccatcgcagaaaacatccgctacggcagagaggatgccacagatgaggacatc
gaacgggccgtgagagaggccaacgcatacgacttcatctccaaactccccgataagctg
aacaccatggtgggggagcggggagcccagctcagtggaggacagaagcagaggatagct
atcgcccgggccctggtcaaaaacccgaagatcctcctgctggacgaggccacctccgcc
ctggacacccagagtgagtcggtcgtccaggccgctctggataaggcgagggcgggtcgc
accacaatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtgatcgctggc
ttcagcaacggagaggtggtggagcagggaacacacagggaactcatggccaagaagggg
gtctactattctctggtcatgcagcagagtcaagggaagccagaggaagatgaagagggc
cctgtggaagaggataaccctcctaaatatgaggatctggattatgtcctatatgactca
tctgacatggatgagatggaagtggtaaacgaggaaggaatagaaaacggcggctttgaa
aggacctcaatcagcagtggccgtgtggaaatgaaaccgaccaggaggaaatctaagaag
tccaagaaagacaagaagaaggaaaagaaaccagaggaagctccagacatccccttcacc
agaatcctggccctgaacaagcccgagtggccgtacatgttggtaggaaccctgtctagc
ttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatcattggagtg
ttttccgaagttgacccggaagtcaaacgacagaaaaccatgatgttttccctgctcttc
cttctcatcggaggagtggcttttgtcacctacttcctaaagggttacatgtttggaaaa
tcaggagagcttcttaccatgaggctgaggagacaggtattccatgccatgatgagacag
gagattggatggtttgatgacaacaacaatgcagtgggagttctaaccaccagattggcc
acagatgcatctctggttaaaggggcgacagggtctaggttgggtctggccaccaacaca
gtctgtgctctcaccattgccattgtggtggccttcatccacagctggcagctcaccctc
ctcatcctcgcctgtgtgcccttcctcattggagccaacgtcattcagatgagggccatg
gcaggccacgcctccaaagaccagggtgccctggagcagtctgggaagatatctactgag
accgttgaaaacttcaagacagttgttggattgatacgggaggacgtcttctttcacaag
ttcatggacagtctagaaagaccataccagaacggtttggtgaaggcccccatctacgga
ctaacatttgccgttgcccaagcaatcccttacatggtcaatgctgcaatcttccgcttt
gggtcctggcttattgctcactgtcacacagaatatgaaaatgttttccttgtgttttct
gtgatcatatttgctgccatgaacataggagaatcagcatcttttgctcctgactttgcc
aaagcgaaagcagctgcagggagaattcttggcttgttggagaagaaaccagagattgac
atttacagtgaggagggagagaagccaacggactttgtcggggacattgacttccgaggg
atccactttgcgtacccgacccgtcagaacgtgagggttctccaggggttgagcctgtca
gtggggcctggtcagaccctggccctggtcggggagagtggctgtgggaaaagcacctcc
atacaactactggagcgcttctatagccctgctgaaggacaagtgttagtggatgggttg
gatactaagaccctgaacctgtcgtggctgaggtctcagctgggcctggtgtcccaggag
cccatcctgttcgactgcagcatctcagagaacatccagtacggggacaacagcagagag
gtctcccaggacgagatagacgaggcagccaagaacgccaacatccacgacttcatcatg
ggcctgccagagaaatacaataccagggttggggacaaggggacccagatgtctggaggt
cagaaacagaggatagccattgccagagcactggtcaggcagcctaaagtactgctgctg
gatgaagccacttccgccctggacacagagagtgagaagattgtccaacaggctttagac
gccgctcggcagggccgcacctgcatcgtgatcgcccaccgcctgtctaccatccagaac
gcagaccagatagctgtaattcagtatggtcaggtgacagagcagggtacacatactgac
ctcatggctaaagggggggcttactgtgccctggtcaacgcacaggtcaatcactaa
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