Salmo salar (Atlantic salmon): 106574080
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Entry
106574080 CDS
T04363
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa04382
Cornified envelope formation
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106574080
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106574080
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106574080
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106574080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106574080
04147 Exosome [BR:
sasa04147
]
106574080
04515 Cell adhesion molecules [BR:
sasa04515
]
106574080
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106574080
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
106574080
Exosomal proteins of colorectal cancer cells
106574080
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106574080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
TMEM_230_134
Sugar_transport
DUF5904
DUF1218
Atthog
DUF202
DUF6594
L6_membrane
Motif
Other DBs
NCBI-GeneID:
106574080
NCBI-ProteinID:
XP_014005096
UniProt:
A0A1S3MQK7
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All DBs
Position
ssa16:complement(49178683..49181564)
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AA seq
217 aa
AA seq
DB search
MTSSAVQLPGYALALIGLVGSMIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDATRH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAVGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFEFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRFMGSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctctgcagttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcaatgattgccaccaccatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacttacctggggttatggatgtcatgcaccgtcgacgccacaagacac
acaatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccgatgcctggaggaggatgaaaagcagaaggatagagtagccattgtt
ggaggattcctcttcatcattgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccagtcctttgaattctcagactcacctacttccttacataacaggttt
gagtttggcaatgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggagga
tttctcctgggctgcaggtttatggggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaatccctggcaccaggcctggcacccactatgtttaa
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integrated database retrieval system