KEGG   Salmo salar (Atlantic salmon): 106574080
Entry
106574080         CDS       T04363                                 
Name
(RefSeq) claudin-1-like
  KO
K06087  claudin
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03272  Virion - Hepatitis viruses
sasa04382  Cornified envelope formation
sasa04514  Cell adhesion molecules
sasa04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    106574080
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    106574080
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    106574080
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    106574080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sasa03037]
    106574080
   04147 Exosome [BR:sasa04147]
    106574080
   04515 Cell adhesion molecules [BR:sasa04515]
    106574080
Cilium and associated proteins [BR:sasa03037]
 Other cilia and associated proteins
  Stereociliary proteins
   106574080
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   106574080
  Exosomal proteins of colorectal cancer cells
   106574080
Cell adhesion molecules [BR:sasa04515]
 Immunoglobulin superfamily
  L1 family
   106574080
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 TMEM_230_134 Sugar_transport DUF5904 DUF1218 Atthog DUF202 DUF6594 L6_membrane
Other DBs
NCBI-GeneID: 106574080
NCBI-ProteinID: XP_014005096
UniProt: A0A1S3MQK7
LinkDB
Position
ssa16:complement(49178683..49181564)
AA seq 217 aa
MTSSAVQLPGYALALIGLVGSMIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDATRH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAVGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFEFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRFMGSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgagctctgcagttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcaatgattgccaccaccatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacttacctggggttatggatgtcatgcaccgtcgacgccacaagacac
acaatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccgatgcctggaggaggatgaaaagcagaaggatagagtagccattgtt
ggaggattcctcttcatcattgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccagtcctttgaattctcagactcacctacttccttacataacaggttt
gagtttggcaatgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggagga
tttctcctgggctgcaggtttatggggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaatccctggcaccaggcctggcacccactatgtttaa

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