Salmo salar (Atlantic salmon): 106574237
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Entry
106574237 CDS
T04363
Name
(RefSeq) integrin beta-6-like
KO
K06589
integrin beta 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04518
Integrin signaling
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106574237
04518 Integrin signaling
106574237
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106574237
09142 Cell motility
04820 Cytoskeleton in muscle cells
106574237
04810 Regulation of actin cytoskeleton
106574237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106574237
04515 Cell adhesion molecules [BR:
sasa04515
]
106574237
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106574237
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106574237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
106574237
NCBI-ProteinID:
XP_014005432
UniProt:
A0A1S3MQH0
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Position
ssa16:65969223..65984668
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AA seq
786 aa
AA seq
DB search
MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYVLQERGCPQDQVEFPVTNSEVLRDQPLGKKTGITNITQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVENNILLIFAVTENQKHNYENYADFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGAPESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGLLCGGHGDCDCGECVCQSGWTGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGATCERCPTCGDSCNSARTCVECHLQAEDEATEECVQRCSVPHVFVNNSTEYD
ESRSTLCTLKSENNCFISFSVVAGDMGSTVYNLKMYDCPEPPNIVMIVVGVSLSILTIGL
ILLVVWKLLISVHDRSEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSTGRPKVDI
HSMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgacgagtgtctccagcttggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaatcagtgagcgatgtgacacg
ccgtacgtcctccaagagagaggctgtccccaggaccaggtagaattcccagtgaccaac
tccgaggtcctccgggaccagcctctcgggaagaagacaggaattaccaacatcacacag
atatccccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agcgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggatttgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccgacgtttggatacaaacacgtcctacccctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaatgactccatg
cgtctgttggtgtttgtgagcgacgcagactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggagaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcagat
ttcatacctggtgccacggtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacagcgtataaagagctgcggtctgagatagagctggaggtactaggagacaca
gaggatctacagatctccttcacagcgatctgtcaggatgggacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgacggtagaactc
tcagagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcaccagacccccgagcccaac
agcagccactgtagcctgggccggggatctctggagtgtggctcctgcctgtgtgatcca
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgctccggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacgcgtctacggggcctactgcgagtgcgacgacttctcg
tgtgtgaggttccgagggttgctctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcagagcggctggacgggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagccacctgtgaaaggtgccctacctgtggagactcc
tgtaactctgctaggacctgtgtggagtgtcatctacaagcagaagacgaggccacagag
gagtgcgtccaaaggtgcagcgtccctcatgtcttcgtcaacaattccacagaatacgat
gagagccggtccacgctgtgcaccctaaagagcgagaacaactgcttcatctctttcagt
gtggtggctggagacatggggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagttatgatagtagtgggggtctctctgtccatcctcaccatcggcctc
atcctgctggtggtgtggaagctgctgatctcggtccacgaccgcagtgaggttgccaag
tttgaggcagagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagcacagggagaccgaaagttgatatt
cattcaatggatggctactga
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