Salmo salar (Atlantic salmon): 106574260
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Entry
106574260 CDS
T04363
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106574260
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106574260
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106574260
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106574260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
HEAT_DAAF5
MMS19_C
ParcG
MMS19_N
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
106574260
NCBI-ProteinID:
XP_014005498
UniProt:
A0A1S3MQJ4
LinkDB
All DBs
Position
ssa16:complement(65596894..65638389)
Genome browser
AA seq
1613 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILTALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPGSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNKFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTSSCQSKSVAVRRRCFEFLDLLLQEWQTSSLE
RNVAVLTETIRKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHIK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTGTRTKAASSRGPSTPGSLQRSRSDV
DVNAAATASAKTRMTPVPASPAPFSAASALPPGSYASLDNTPGNIRPEGRVRTRRTSSGS
GVGASPSVTDSRGRSRAKMVSVSQPGSRSGSPGRLLSQTYGRIPRATGATTPADRRPKVP
RSHGCSRDTSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRST
SALHSAESVGHSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPV
RRRYESPGIYSDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSER
KEGLLGLQSLLVSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHREDV
QDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNL
KVKVAILRYIECLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSWAGEEL
SGRPSTTVASLPGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLH
SHLRNSSSTGVASPSSTMGRTPPPPRHTSSRSSPLTSPTNCSHGGGLSPSRLWGWSADGL
SKYPPPFPSPLSSTPAAPSLKTLRSAFSPSMLEYDTENLNTDQIYSSLRGVTEAIQNFSF
RSQEDLMEPGRGKREDTPGVGTASHSGVDVVEGPGGRTALDNKTSLLNTPSPRSFSGPRG
RDYNPYNYTDTISAYDKAALRETVYEDDVEQLREGRQECGGENKMLRTKNSSPAEQLELV
GELLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETLSDQDHTIRA
LALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQCI
KVLCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKAS
VFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tctagcaatttcaaggtggctttgttgggaatggacatactgacagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagagaccaggaccaagctctcctgctaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggaccagggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctacagacacgtcggggag
agggtgcggatggacctggggaaaaaaggactaccacagtcaaggttgaatgtcatcttc
agtaaatttgatgaagtacaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccggctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccgctatgcaacttttctccaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggagcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aagtttgatcattgtgctgagtccatcatgcccacactcctaaccctggtctctaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccagcagctgccagtccaaatctgtggccgtgaga
aggcgctgttttgagttcttggacctcttgctgcaggagtggcagaccagctctctagag
aggaatgtagctgttctgacagagaccatcaggaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcaactgttccaggctctagagtcgtcctatcagaaggctctccagtcccacataaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtccgccaagagctccatgggaaacaccgggaccaggacgaaa
gcggcttcctccagaggtccctccaccccgggctctctccagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgctagtgccaagaccaggatgactcccgtgcccgcctcg
cccgcccccttcagcgctgcctccgctctgccacccggctcctacgcctctctagacaac
acacctggtaacattaggccagagggccgtgtgcgtaccaggagaacgagttcggggagc
ggcgtgggggcgagtccctctgtcacagacagtagggggaggagtcgagccaaaatggtg
tcagtgtctcaacctggcagtcgttctggctcccctggtcgtctcctcagccaaacatac
ggcaggatccccagggcaactggagcgacaacgccagcagacaggaggcctaaagtcccc
cgcagccatggctgcagccgagacaccagtccagacagatcaggcctggcgaggagtcgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagggagagcagccgg
gacaccagccctgctcggggattctctcctctggcgtccagacgggtctcccgctccacc
agtgctctccactcggctgagtctgtgggccactcagagcgtctaggtctggcccaccag
gcccgtatctcagcctctgtcaatgccatgaggatcctcaacactgggaccgaggtggag
gcagccgtagccgatgccctgttactaggagatgccaggaacaacaagcggcggccagtc
agacggcggtacgagtccccgggcatctactcagacgacgacgctaacagcgacgccagc
agcgcctgctctgagcgctcgtatggctcgcggaacggcggcccgccccactacatgaga
cagacggaggacgtggccgaggtgctgaaccactgtgccagttccaactggtctgagagg
aaggaggggctgctgggactacagagcctgctcgttagccagagaattctcagccgtgtg
gagctgaagaggttgtgtgagatcttcacaaggatgtttgctgacccacacagcaagcga
gtgttcagtatgtttctggagaccctggtagacttcatcaccctgcacagagaggatgtg
caggactggctgtttgtcctgctcacccagctgctgaagaagatgggagctgacctcctg
ggttccgtacaggccaaggtccagaaggctctggacgtcaccagggactcattcccgttc
gaccagcagtttaacatcctgatgcgtttcatcgtggaccagacccagacccccaacctg
aaggtcaaggtggccatcctgaggtacattgagtgcctggcccgtcaaatggaccccgcg
gactttgtcaactccagcgagacacgcctggccgtctcccgcatcatcacctggaccacg
gaaccaaagagctccgacgtcaggaagagcttccaccatagctgggcaggtgaggagttg
tcaggcaggcccagcaccaccgtagcctctctacctggagaggggaacgtggaggagcgg
tgcaagcaggcggcccaggtggttctgatcgccttgttcgagctgaacaccccagagttc
accatgctgctgggggccctgcccaagaccttccaggacggagccactaaactgctgcat
agccacctccggaactccagcagcaccggcgtggcttctcccagtagcaccatgggacgg
actcctcccccacctcgccacaccagcagtcgcagcagcccactcacctctcccaccaac
tgctcccatgggggagggctctctcccagtcggctatggggttggagtgccgatggcctg
tcaaagtacccccctcccttcccttctcctctctcctccacccctgctgccccctccctg
aagaccctacgaagtgctttctctcccagcatgttggagtacgacacagagaacctgaac
accgatcagatctatagctccctgcgaggcgtcactgaggccatccagaacttcagcttc
cgcagtcaggaggacctcatggagccaggcagaggcaagagagaggacacgccgggtgtt
ggaacagcatcacactctggtgtcgacgtggtggaggggcccgggggtcgcacggccctg
gacaacaagacctccctactcaacaccccctccccgcgttccttctccgggccccggggc
cgcgactacaacccctacaactacacagacaccatcagcgcctacgacaaggctgccctg
agagagacggtgtacgaggacgacgtggagcagcttcgagagggccgccaagagtgtggt
ggagagaacaagatgctgcgcaccaagaacagttcccctgcggagcagctggaactggtg
ggtgagctgctgaaggagctgtctaaccccagtgagaggccagaggagaggaggggagcc
ctggtggagctgctgaagatagcccgggaggacagcctggcagtgtgggaggaacacttc
aaaaccatgctgctcctgctgctggagaccctgtcagaccaagatcacaccatccgggcc
ctggcactacgagtgctgaaggagatcttacgtaaccagccggcccgcttcaagaactat
gcagaactcaccatcatgaagactctggaggcacacaaagactcccacaaagaggttgtg
cgggcagcagaggagtcagcctccaccctggccggctccatccacccagaacagtgtatc
aaggtgctgtgtcccatcgtccagacggctgactaccccatcaacctggcttccatcaag
atgcagaccaaggtgatagaacgcatcaccaaggagtccctccaccagctgctgcctgac
atcataccaggactactgcaggggtacgacaacacagagagcagtgtgaggaaggccagt
gtgttctgtctggtggctgtctactctgtcatcggtgaagagctgaagccctacctggcc
caactcacaggaagcaagatgaagctgctgaacttgtacataaagagagcccagacgtcc
accagcaacagcagcagctcctcagacatctcctcatattaa
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