Salmo salar (Atlantic salmon): 106574282
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Entry
106574282 CDS
T04363
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106574282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106574282
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106574282
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
ADSL_C
Motif
Other DBs
NCBI-GeneID:
106574282
NCBI-ProteinID:
XP_014005552
UniProt:
A0A1S3MQT4
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Position
ssa16:64471859..64474742
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AA seq
301 aa
AA seq
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MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPT
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcagctgtaaccacggctctggcccaagtggatagggaaaagatc
taccagtggatcaacgagctgtccagcccagagacccgcgagaatgccctgcttgagctc
agtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtggaact
atagctgctctcctgcaggaaattgtcaacatctacccctcaataaaccccccaaccctc
accgctcaccagtccaacagagtatgcaatgcattagcacttctgcagtgtgtagcctct
catccagagacaagatcggcatttctggcagcacacattcctctattcctgtaccccttc
ttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctaggagtc
atcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacaacagaa
atcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggtagca
acttttatactacagaaaatactccttgatgacacagggctggcatacatttgccaaaca
tatgaacgcttctcccatgtggccatgatacttggcaaaatggttcttcagctttccaaa
gagccctccgctcgtcttttgaaacatgttgtccgctgttacctacgcctgtcagacaac
tccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagcttaaa
gacaccacgtttgcccaggtcctgaaggacgacaccaccaccaaacgctggttggcacag
ctggtgaagaacctacaggaaggccaagtcacagatcccaggggcatccctctgcccaca
cagtag
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