Salmo salar (Atlantic salmon): 106574396
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Entry
106574396 CDS
T04363
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106574396
Pattern recognition receptors [BR:
sasa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106574396
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_5
LRR_NXF1-5
LRR_LRWD1
DHU1_N
Motif
Other DBs
NCBI-GeneID:
106574396
NCBI-ProteinID:
XP_014005725
UniProt:
A0A1S3MRL3
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Position
ssa16:67047189..67050443
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AA seq
917 aa
AA seq
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MKVLCYNRNLEVIPIYIPRKVINLDLAMNKISKIKKLDFKGLSNLKILNMSRNQISQVDD
GALGYLEALQELGLAHNRLTTLSDHLFQGLVNLSLLHLDNNLIATISSSSFQPLSSLKTV
NLTNNNLYNMKDVQPIVQLPHLHELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIF
RITADVLPYLEVIDIAYCGQLGHMEWDVLDRSFLRNVNRLNLSGIEMSFERMGMVLQTVN
SSLVHLRLNDLVNGSRLKIKALTDIACHIPTLSVLRLEYNNIGNLSEEFLQSCKHTTEVD
ISDTGLTQLSDFSFRSIEQLSTLKLGHNRLSSVPKATRNLPKLKILDLSFNIINKLGCSD
FSNLTGLTQLFLFHNQIPNLPGCVFQDLKELRLLKLGSNKILTLNDAFMNGLHKLQTLSL
ASNKLSSIRKGEFKSLTSLNNLFLFDNQIASMENGAFEGLVNLTDLLLCSNKITQIAIRN
TVLTGLPLLKSLDISCNYITYVNDDKLNPPPFSHLTSLEDLRIFSQRHKGLSHLPINFLE
GLKSLLSFQAGSLNIKELHPDTFIHTPQLWFLDISKNEFTAITLKLFHPIPRLNSLYLSK
ARLQSLDFLIGANLSRVTFLQVSKNDITVVNETVLHSLPALTYLDMQDNAFTCGCSDAWF
VHWMENDNQTQVVGAGEFTCNYPADLKDTKLLDVELQFCTVHFGLHCYISTTTLVLLTLV
ASFAYHFLKWQVVYGYYLFLAFLYDTKQRNKHTPHGCQYDAFISYNAHDEPWVLRELLPE
LEGEQGWKLCLHHRDFQPGKPIIDNIMEGIYGSRKTICVISRRYLESEWCSREIQVASFR
LFDEQKDVLILVFLEEIPTHQLSPYHRMRKLVKRRTYLSWPRTGEQTGVFWQQLRLALET
KDGSSEENPILSGVQAL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactctgttataacaggaatcttgaagtcataccaatatatattccgcggaaa
gtaatcaatttagacttggccatgaataagatttccaagattaaaaagttggattttaaa
ggcctatcaaacctaaaaattctaaatatgtccagaaaccagatctctcaagtggacgat
ggggctcttggatacctagaggctcttcaggaactgggtttggctcataacagactcaca
accctgtcagaccatttgtttcagggcctggtcaacctctccctgctacatctggacaac
aacctcattgcaaccatcagctcctcatcctttcagcctctctccagtttgaagacagtg
aatttaaccaataacaacctttataatatgaaggatgttcagcccatcgtacaattacca
cacttacatgagctgtacattgggagcaacagattcacctctttccagtcacaggaaata
tcaaacacttctatagagctgaggctgttggatttatccaggaatccattgggaatcttc
aggatcacggcagatgttcttccttaccttgaggtgatagacatcgcctactgtggccaa
cttggacacatggaatgggatgtcctggacaggtcttttctgagaaacgtcaatcgtctc
aacttgagcggcattgagatgtctttcgagaggatgggtatggtactgcagactgtcaac
tcctccttagtccatctgagattgaatgacctcgtcaatggctcaaggctcaagatcaag
gctctcactgatattgcctgccatatacctacactcagcgtgctccgactagaatataac
aacataggtaatctctctgaggaatttctgcagtcatgtaaacatacgacagaagtggac
atatcagatactggtcttactcagctgtctgacttttcattcagatcaatagagcaatta
agtactttgaaactgggccacaataggctttcttctgtgccaaaggccacaagaaatcta
cctaaactgaagatcttggatctcagcttcaatatcatcaataaactaggctgctcagat
ttctccaatcttacaggactcacacaactctttcttttccacaatcaaatccccaacctt
ccgggatgtgttttccaggatttgaaagaattaaggctccttaaactgggatcaaacaaa
atcctgaccttgaatgatgccttcatgaatggtttgcacaaacttcagactttgagtttg
gcaagcaataaactgagctctatcagaaaaggagagtttaaaagcttaacatcactcaat
aatctgtttttatttgacaatcagattgctagtatggaaaatggagcctttgagggattg
gtcaacctgacagatcttctactgtgctcaaataagatcactcaaatagccataagaaat
actgtgctcacgggactcccacttttaaaaagtcttgatatatcctgtaattacatcaca
tatgtaaatgatgataaactaaaccctccaccattctctcatctgacatctctggaggac
ctcaggatatttagtcagcgtcacaagggactgtctcatctacctatcaacttccttgaa
ggactgaaatctttattgtcattccaagcagggagtcttaatattaaggagctgcaccca
gacacattcattcacacaccccagttgtggttccttgatatcagtaagaatgagttcaca
gccatcactctaaagctgtttcacccaatcccaagactcaacagcctgtacctgtccaaa
gcccgacttcagtccttagatttcctcataggagcaaacctcagtagagtcactttcttg
caggtgagcaagaacgacataacagtagtcaatgagacagtgttgcattctctccctgcc
ttgacatacctggacatgcaagataatgctttcacctgtggctgcagcgatgcttggttt
gtccattggatggagaacgacaaccaaacacaagttgttggtgcaggagaatttacctgc
aactatcctgccgatctaaaggacaccaagctgttggatgttgagcttcagttctgtaca
gtacactttggacttcactgctacatctctaccactactctggtcctcctcaccctggta
gcatcctttgcctaccacttcttgaaatggcaggtagtttatggctattacctcttcctg
gctttcctctatgacaccaagcaaaggaataagcacacgcctcatggctgtcaatacgat
gccttcatctcctacaacgcccacgatgagccctgggtcctgagggagcttctgccagag
ctggagggagagcagggctggaagctgtgtctccaccaccgggacttccagccaggaaaa
ccaatcatagacaacattatggaaggcatctacggaagccgcaagaccatctgtgtgatc
agccgccgctacctggagagtgagtggtgctcccgggagatccaggtggccagcttccgg
ctctttgatgagcagaaggacgtcctgattctggtgttcctggaggagatccctacccac
cagctgtcaccctaccaccggatgaggaagctggtgaagagacgcacctacttgagctgg
cccagaactggggagcaaaccggggtcttctggcagcaactacggctggctttagagacc
aaggacggctcttctgaggaaaatcccatcctctctggtgtgcaggctctgtga
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