Salmo salar (Atlantic salmon): 106574703
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Entry
106574703 CDS
T04363
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106574703
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
106574703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_MYOM1
Ig_5
VEGFR1-3_N_Ig-like
C2-set_2
Ig_6
Ig_4
Izumo-Ig
VEGFR-1-like_Ig-like
Tissue_fac
Ig_SEMA-3_4_7A
fn3
Motif
Other DBs
NCBI-GeneID:
106574703
NCBI-ProteinID:
XP_014006191
LinkDB
All DBs
Position
ssa16:76027137..>76045386
Genome browser
AA seq
990 aa
AA seq
DB search
MDIFGGAPRVLGYSRPVVAQCGTDAVLQCKIGGDPRPEVVWEKKNVQILSEGRYRLSEEG
QAYFLHITGVRLEDAGQYICKASNSVGETCAPATLKVEGNSQERQGAQKQTEVNGVQQTR
LENGELGGQWNGEFRRQQSSELEGQQNQNGEYRQQENREYGGQQNGEVEQRKGEVDQQSG
EVEKENGEGSEREKKKQRYEGEPLLSDDRPHFLIKPLSLRVDRGEDAAFSCKLSGNPLPQ
VVWEKDGKKLSDIFESTHFNVSSQDGGWFQLKIFRTRMPDGGVYTCRAHNNQGGALAGAV
LLVELVPERQESGASTSNGCSNGQTSPRSIRHRMGRHGLSRQPDEPNLNSSNVKKFAVSE
GKHAKFRCFVTGKPKPEIIWKKDGSPLEAGRRHLLFEDREGYYTLKVMYCKHQDTGLYVC
AASNALGHTLSSVYLTVKAPAVRFRRSLQDVEVRERGMAVLECEVPNEGIPTAWYLEDQR
LQPGGKYGIEQKGTRRRLTIRDVGADDDGVYLCEMPDGGKSIAELAVKGTIVKKLPRKLD
VLEGENAVFCVEVEEENMDVHWFKDGLKLRESHQTILKSFGKTHILVFVNVCHGDTGVVT
FVVGRSKTSSRLRVKAARHSPPICPVGVEMDVDRPNSVLLSWEPAPTSQTTTRSVYVLER
QEVGSQEWLRCATSDTVTSAEVMGDSVPCEGDYRFRVCCINKYGRSGHVEFPKVIHLVPG
PKIRTPLQGCEVTEREDALFSIDLSVMVTGTWFLNSTQLQDSQRYSIQQTKTQHSLIIHS
TKVEDHEAEVTFIANGVRDSAVLKVQAAVVKFSPMSESDSNKRVETGDPVVLYCEVSHPS
ARVGWFKDGVELQVTDGLNIQSEGNMRRIVIQSAEFTNSGVYTCETMDDVIKFNVEVEGP
PVQFSEVPEEELQKSAMELDPVVLTCEVSREDANATWYKDGVEVQASDNITIQTEGTMRR
LIIHCAETSDAGTYSCQSGDNSLSFTVNIK
NT seq
2971 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctactcgcgccccgtggtggcacag
tgtggcacggacgccgtcctgcaatgcaagattggcggcgaccctcgtcctgaggtggtc
tgggagaagaagaatgtacagatcctgtcagagggacgctacaggctgtcggaggagggc
caggcctacttcctacacatcactggggtcaggctggaggacgcaggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgcgcccctgccacactgaaggtggaggggaac
agtcaggagcggcaaggggcacagaaacagacagaggtcaatggggtgcagcaaaccagg
ctggagaatggagagttaggggggcaatggaatggggagtttagaaggcaacagagcagc
gagttggaggggcaacagaaccagaatggggaatatagacagcaagagaacagggagtat
ggagggcaacagaatggggaggtagagcagaggaagggagaggtagaccaacagagcgga
gaggtagagaaggaaaatggagaggggagtgagcgggagaaaaagaagcagcgctatgaa
ggggagcccctgctgtcagacgacagacctcacttcctcatcaagcccctctccctgagg
gtggaccggggcgaggacgcagccttctcctgtaagctgtcgggtaaccctctgccccag
gtggtgtgggagaaggacgggaagaagctgagcgacatcttcgagagcacccacttcaac
gtcagcagccaggacggaggctggttccagctgaagatcttccggacgcggatgcccgac
gggggtgtctatacctgcagagctcataacaatcaaggaggggctctggcgggcgcagtg
ctgcttgtggagctcgtcccggaacggcaggagagcggggcgtccacgtcaaatggttgc
agcaacgggcagacatcacctcgtagtataaggcacaggatggggagacatggtttgtcc
agacagccggacgagcccaatctgaactcgtccaatgtgaagaaatttgcggtgtcggag
gggaaacatgctaagttccgctgcttcgtgacagggaaacctaagcctgagatcatctgg
aagaaagacggatcgcccctagaggctgggaggcgtcaccttctgtttgaggacagagag
ggttactacacgctcaaagtgatgtactgtaaacatcaggacacagggctgtacgtgtgt
gctgcgtccaacgctctgggacacaccctcagctctgtttacctgactgtcaaagctcca
gcggtgcggttcaggcggtcactgcaagacgtggaggtgagagagagaggcatggccgtg
ttggagtgtgaggtacctaatgagggcatccctactgcctggtacctggaggaccagaga
ctgcagccaggaggtaaatacggcatagagcagaaaggaaccaggcgcaggctcaccatc
cgagatgtaggagcggacgacgatggggtctatctctgtgagatgcctgatggagggaag
agtatcgctgagctggccgtcaaaggcacaattgttaaaaaacttcctcgaaaactagac
gtgttagagggggagaacgcagtgttctgtgtggaggtagaggaggagaacatggatgtc
cactggttcaaagatggcctgaagctacgcgagagccaccagactatcctcaagtccttt
ggtaaaacccacatcctggtgttcgtcaacgtctgccacggggacactggggtcgtgacc
ttcgttgtgggaagatccaagacctcttcccggctcagagtcaaagctgccagacacagc
cctcccatctgtccagtgggggtggagatggatgtggacaggcccaacagcgtgctcctc
tcctgggagccggcccccaccagccagaccaccacgcgctccgtctatgtcctggagaga
caggaggtgggatcgcaggagtggctgaggtgtgcgacctccgacacggtgacctccgca
gaggtcatgggagacagcgtaccgtgcgagggcgattaccgcttccgcgtctgctgcatc
aataagtatggtcgtagtggacacgtggagttccctaaagtcatccatcttgtgccaggt
cccaagatcaggacccctctccagggctgtgaggtgacggagagggaggatgccctgttc
tccatcgatctgtctgtgatggtgacgggtacctggttcctgaacagcacccagctacag
gacagccaacgctactctatccaacagaccaagacacagcactccctgatcatccacagc
accaaggtggaagaccacgaggcagaggtcaccttcatcgccaatggagtcagagactca
gcggttctcaaggttcaagctgctgtggtgaagttcagcccaatgtcagagtccgacagt
aacaagagggtggagactggtgaccctgtggtcctgtactgtgaggtgtcccacccctca
gccagggtgggctggttcaaggatggggtggagctacaggtgacagacggcctcaacatc
caatcagaaggcaacatgaggaggatcgttatccaatcggctgagttcaccaactctggc
gtgtacacatgcgagacgatggatgatgtcatcaaattcaacgtggaggttgaaggtccc
cctgtgcagttcagtgaggtccctgaggaggagctccagaagtctgccatggagctggat
cctgtggtgctcacctgtgaggtttccagagaggatgccaacgctacctggtataaggat
ggggttgaggtccaggccagtgataacatcaccatacaaacagagggcaccatgaggaga
ctgatcatccattgtgctgagacctcagacgcaggaacctacagctgtcaatcaggagac
aacagcctctcattcactgtcaacatcaaag
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