Salmo salar (Atlantic salmon): 106574713
Help
Entry
106574713 CDS
T04363
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106574713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106574713
03021 Transcription machinery [BR:
sasa03021
]
106574713
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106574713
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
106574713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
106574713
NCBI-ProteinID:
XP_014006201
UniProt:
A0A1S3MTV4
LinkDB
All DBs
Position
ssa16:complement(76167709..76174808)
Genome browser
AA seq
631 aa
AA seq
DB search
MADGGVMSQYESSGPDSIINLSVSSKSNMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANLLQTPTITIASQAAAPTRTITATPGQLLIHSQTPPPKGLGTPTLEDASDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNNRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLASATGNTASVISSTPTVPSMSLTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPSLMPSSQFNTGGALLNLTTAGFGGALATIQGV
LSALASSGSFPITTLDGNGNLLFANTSMSGSAPSIVNTPLFLNPQSLSLLGSNPVSFIPA
SALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagactcgataatcaac
ctgtcagtatccagtaaaagcaacatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggactctcagaagcagactgtcatgtccctcaccaatgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactccgccagccaggcccagaacagcagc
accacaggggccgccatctctgcctccgcagccacccccatcaccacccaactcccactg
tcccagcctatacacatcacccctcttcagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatctcccagactcca
cagggacagcccagtatgtttcagtatcataatctcctacaagcccaaaatcttctcact
caactacctcagagccaagccaacctcctacagactccaactatcacaatcgcctcacag
gcggccgctcccacgcggaccataactgccacccccggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggacgccagtgatctggaagag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggcttcacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgcaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcacccagcctggcatctgacctcaataaccggcgccgcaagaag
aggaccagcatcgacaccaatatccgcgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaatcctcccagc
agctcggctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgaccgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggcgtcagccaccggcaacacagcatccgtcatctccagcacccctaca
gtcccctctatgtccctcacaccctcctcctctgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcagatgctctacagcaacggcgggggtctggctgcaatggcg
gctgcagcggcgggaatcagcccgagtctcatgccctcatcgcagttcaacacagggggg
gccttactgaacctaaccactgcaggttttggaggagcgctagccaccatccaaggtgtg
ttgagtgctctggcctccagcgggtccttccccatcaccaccctagacgggaatgggaac
ctactatttgccaacaccagcatgtctggctctgcccccagcatcgtgaacacgcccctc
ttcctgaacccccagagcctgtccttattgggtagtaaccctgtcagcttcatccctgcc
agtgccctcagcctgcaactcactgctggcaccaacaccatcaccacggcaaccacacca
gtcaacaccatcgtcagagcctctaaggcccaatga
DBGET
integrated database retrieval system
