Salmo salar (Atlantic salmon): 106574770
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Entry
106574770 CDS
T04363
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
sasa
Salmo salar (Atlantic salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
106574770
NCBI-ProteinID:
XP_014006297
UniProt:
A0A1S3MSZ9
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Position
ssa16:77738382..77743650
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AA seq
772 aa
AA seq
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MAKTLPSTHLLLVALQLCLVLRHHARGAAYYGHKQPQHPQQHLPQQHQPMQQLPHMSLGN
GYGNGNGNGDGLPQQQYGKEMPQHMPYGKEMPYVLPQYGQELPQMLPQMHEQPQMPPNKG
KGKGQSYPSNGKGLGGPPPDDRELQGPGPEGPPGAQGPPGPQGPPGMLGQGMPGPHGKPG
PPGPQGYPGIGKPGMPGMPGKPGGGGQPGPKGDLGPGGDVGQMGMPGGPGLPGPPGLPGI
GKPGGQGLPGQPGPRGEPGHKGIPGLPGLPGPKGDKGIGLPGLPGLKGPGGPPGPPGQGG
LPGVGKPGLNGLPGLPGGAGKPGPPGEGGLAGPPGEGGEPGPPGLPGIGKPGQDGLPGQP
GFPGGKGESGPPGLPGGPGLPGYGKPGYPGPKGDKGHGGFPGAPGPKGDKGHGGLPGQEG
LPGPNGPPGLPGPIGPPGGLGFPGPKGEGGNGGPKGLPGTKGEPGPPGLPGQGGYPGEGG
HPGPRGIPGPLGPKGDNGHKGLPGLPGAPGMPGSRGEGGMPGEKGHQGPKGIPGNFGPGG
PLGPPGLPGPKGELGPPGKPGYPGEGKPGVPGALGPQGKPGNGGPPGQPGQPGQPGPPGP
PGPPTQPPGLGEILPEMGPALDGLKQGGYKKPKNGGDRNGLEMPAFTAQLTNPFPPVGSP
VVFDKLLYNGHQDYNPQTGVFSCTIPGIYYFAYHVHCKGANVWVALVKNNEPVMYTYDEY
KKGSLDQASGSAVLPLQQGDTVHVQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaccctcccctctactcatctattgttggtggcactccagctgtgtctagta
ctacgccaccatgcccgtggggcggcatattacgggcacaagcagccgcagcacccacag
cagcaccttccccagcagcaccagcccatgcaacagttacctcacatgtccctagggaac
gggtatgggaacgggaacgggaatggggacgggctgccccagcaacagtatgggaaggaa
atgccacaacatatgccatacggcaaagagatgccatatgtgctgccacagtatgggcaa
gaacttccacagatgcttccacagatgcacgaacaaccccagatgccacccaataagggc
aagggaaaaggtcagtcatatcccagtaatgggaaaggccttggaggcccaccacctgat
gatagggaactacagggtcctggtcccgaggggccaccaggagcccaagggcctccagga
ccacagggccctccagggatgctaggtcaagggatgcccggcccccatggaaaaccaggc
cctcctggtccccaagggtatcctggcatagggaaacctggaatgccgggaatgcccggt
aaacctggtggaggtggccagccaggtccgaagggcgaccttggtcctggtggtgatgta
ggacaaatggggatgcctggggggccaggtctcccagggccaccaggcctgccaggcatc
gggaagccagggggtcagggactgcccggacagcctgggcctcgaggggagcctggacac
aagggcatacctggactgcctggtcttcctgggcccaagggagacaaagggattggcttg
ccaggattgccaggtttgaaaggacctggtggaccacctgggcctcctggtcaaggggga
ttgccaggggttggaaaaccaggtctgaatggactaccaggattgcccgggggggcagga
aaaccaggcccacctggagaaggaggacttgctggtccaccaggtgaaggaggcgaacca
ggaccacctgggctaccaggtattggcaagcccgggcaagatggtttgccaggacaacca
gggttcccaggcggtaaaggggaatcaggcccaccaggtttgccagggggcccaggccta
cctggttacggaaagccaggatatcctggaccaaaaggagacaaaggacatggaggtttt
cctggagctccaggcccaaaaggtgacaaaggtcatggaggtctcccagggcaggaaggc
cttcctggacccaacgggccaccgggcctgcccggtcccattgggccacctgggggtctt
ggtttcccaggtccgaagggagaaggtggcaatggaggaccaaaggggctgccaggtact
aaaggtgagccagggcctccagggcttcctggacagggtgggtatcctggagagggtggt
catccaggaccgagaggtataccagggccactgggtccgaaaggggataacggccacaaa
gggttacctggcctccctggagctcctggaatgcccggctcaaggggagaaggtggaatg
cccggagaaaaaggtcaccagggacccaagggaatcccaggaaattttggtccaggtggg
ccacttggtcctcccggtcttcccgggccaaaaggcgagcttggtccaccagggaaacct
ggctaccccggcgaaggtaaacctggtgttccaggtgctttagggccccaagggaaacct
ggcaacggtggacccccaggtcagcctggacaaccaggacaacctggtccccctggccca
cccggaccccccacccaaccacctggtcttggtgaaatcctccctgagatgggtcctgct
ctggacggtcttaaacaaggcggttacaagaaaccaaagaatggaggggacaggaacggc
ctggagatgccagcattcacggctcagctcaccaatcctttcccccccgtaggctcccct
gttgtcttcgacaagctcctgtacaatggccatcaggactacaatccccaaaccggtgtc
ttcagctgtaccataccgggaatctattactttgcttaccacgtccactgcaaaggagca
aatgtgtgggtggcgctggtcaagaacaatgagcctgtgatgtacacatatgatgagtac
aaaaagggcagcctggaccaggcgtcagggagcgctgtgctccccttacagcaaggagac
actgtgcatgtacagcttccatctgaccaggcagcaggactttatgccggtcaatatgtc
cactcttcattctccggatatttattgtacccaatgtaa
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