Salmo salar (Atlantic salmon): 106574995
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Entry
106574995 CDS
T04363
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106574995
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106574995
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106574995
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106574995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
106574995
NCBI-ProteinID:
XP_014006599
UniProt:
A0A1S3MTV6
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Position
ssa16:85120910..85130486
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AA seq
893 aa
AA seq
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MFNKTGPGLSSRGVLWGLCILVLYTSPLSCFAHFSQAKELVYKIKEGLPSGTLIGSMGSD
LHLDLSLDPHVLFSLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPEASEYNQGCVLS
LDVFILPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSIPENTQVNTRFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTHELDRERQEEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGEQLSRLHAFDPDQGANAVISYAY
SDRVPGEARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCIPAVAMVTVHVIRV
ASGPPVIMPRYIAAEKDGVVTMKESEPPFSPIAFFTVKNTDQRGQRTECLLEGSGPFRLS
PYKVFKNEYLLETTEPLDYEQRQDYELTVVLRNPRGLIIKTFIKILVQDENDNAPVFKQS
LCEVSVEENNPPNSFLAQLQATDQDSEARGEVIYLLGSDAPSIFLLDRLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSILNGSDIFVIDTGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEAETQMEEKPWYVGKLTERPGREDVFPCQPLLIALSVTCLG
LFCIVVTLTAYICCKKLKKWKKHQMKRLEVEMPLKMNGDLQDVDRKRMEISNI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaacaggacccggactaagctcgagaggagtactgtggggtttgtgcata
ctcgtcctttacaccagccctctctcctgttttgctcatttcagccaagcgaaagagctg
gtctataagataaaagaaggattaccctcagggacgctcatagggtccatgggctccgac
ttacacttggatttatccctcgatccccatgttttattcagtctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacatctgggaatgag
atcgacagggagacgctctgccccgaagcctcagagtacaaccagggctgcgtcctctcc
ctggatgtgttcattctaccccagcagtacttccagctggttaaggtcaagatcttagtg
gaggatgttaacgataaccggccgcgcttcccgacaggcgagattagggtttccatcccg
gagaacacccaggtcaacacgaggttcgcggtggagcagtcagcaacggatcctgatctg
gggtttcacggggtccagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaagggggtgagctgacacccttcctcatcgtgacacacgagctggac
cgggaacgacaggaggaatacgtaacggatattatagcagaggacggcgggttaccacct
cttcttggcaccgccacgttaaggattataatcactgatgtcaacgataactgtcctcag
ttcacagagtcacaggtcaacgtgacgctgtacgggaatacgactaaaggagagcagctg
tccaggttacacgccttcgaccccgaccagggcgccaacgcggtgatcagctatgcgtac
agtgaccgcgttcccggagaggctagagctctattccatctggaccggattaccggcgtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctacaaactcaccgtcctc
gccaacgggcctgggtgcatccctgccgtcgccatggtgacggtacacgtgatccgggta
gcttccggtccgccggttattatgccgcgctacatcgcggcggagaaagacggtgtggtc
acgatgaaagagtccgaacctcctttttccccaatcgcgtttttcaccgtgaagaacacg
gaccaaagaggacagaggacggaatgcctgctggaaggatccggcccgttccgactgtca
ccttacaaagtgtttaagaacgagtatctgttagagacgacggagccgctggactacgag
cagaggcaggactatgagctgactgtggtgctcaggaaccccagaggtctcatcatcaag
acctttattaagatcctggttcaggatgaaaacgacaacgcgcctgtcttcaaacagtct
ctgtgtgaggtctctgtggaggagaataaccctcccaacagcttcctggcccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacctgctggggtcagacgct
ccctccattttcctcctggacagactgacgggtgtgctgaccgtgtccacatctctggat
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagttgtcatcactgtgctggaccgtaatgacaacagcccgcgc
ttcatcaataaagacttcacattctttgtgccggagaatttcccggggtttggcgagatc
ggcgttctctcggtaacggacgcagacgcaggcgagaacggctgggtggcactctccatc
ctcaatggcagcgacatctttgtgatcgacacggggcgaggcgctctaagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaagcagtcgacggaggg
gaaccctctctttcctgcctcaccatggttactgtcctcctccttgacgtaaacgataac
cctcccatcgtcttgttcccccagtctaaccagtcctacatgctagtgttacctagcacc
ttaccagggacctccatcacagaggtgtacgccgtggataaagacacaggaatgaacgct
gttatcgcctacagcatcatcaagaggaaaggtggcgagccgggatcgttcgatatcgac
ccggacacagggaacatcacgttgaagagagaactcagtgaccgtggtctctatagccta
ctggttaaagtctcggatcacggtcagcctgaacctctccactccacggtcctggtcaac
ctctttgtcaacgagacggtttctaatgagagctatatccagagtcttctcaccggggaa
gctgagacccagatggaggagaagccgtggtacgtggggaagctgacagagaggcctggc
agggaggacgtgttcccctgtcagccactactcattgctctgtcagtaacctgcctggga
ctattctgcatcgtcgtcacattgactgcttatatatgctgcaagaaactgaagaaatgg
aagaaacatcaaatgaaaagactagaggttgaaatgcctttgaagatgaacggtgacttg
caggacgtagatagaaagcggatggaaatctctaacatttga
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