Salmo salar (Atlantic salmon): 106575056
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Entry
106575056 CDS
T04363
Symbol
prpf3
Name
(RefSeq) pre-mRNA processing factor 3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106575056 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106575056 (prpf3)
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106575056 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
106575056
NCBI-ProteinID:
XP_014006670
UniProt:
A0ABM3EUU7
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Position
ssa02:6878758..6893081
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AA seq
711 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPEAGDGVPVKRKR
VPRFEEVEEPEVLPAPPTESPGMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDPPFASRLLPAPSAPSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIVNTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTIYFDGRVNIAPAQRAKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTETNFVTMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLNRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEIKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctgcggccctgggtggaacggaccgtgaag
aaggtgctgggtttctctgagcctactgtcgtcactgcggccctgcactgtgtaggcaag
ggcctggacaagaggaagactacagaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactattcgaggccctggaggagagccgcaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagacctgaaggatgtgtttggtgatgaggtggag
gtgggtgcgaggcgggacgtccccgaggcaggagatggtgtgccggtgaagaggaaacgt
gtcccccgcttcgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctggcatgctcactaagatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagaccccccttttgcctctcgtcttctccctgctccctctgccccc
tcctcgggctctgcccagtccatcgctccctcccaggcagctactttcatgaacgatgcc
atcgagaaggctaggaaggctgcagagctgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgttaacactggaggacctcataacctggtggcgctg
gccaacctacacgccatggggatagcaccaccgaaggtggcagaggcccgtgagtcaaac
aagccggcccctctgattctggatgatatgggtcggaccgtggatgccagcggcaacgag
gtggagctaacacaccgcatgcccacgctcaaagctaatatccgtgcggtgaagagggag
cagttccgtcagcagttgaaggagaagcctggcgaggacctggagtccactatctacttt
gacgggcgtgttaacatagcacccgcccagcgagccaagaagggcttcaagttccacgag
cagggacgctttgagaagatcgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagacagggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgctgggagacgggcaggtgcccatcattgagtggtgggac
tcatacatcctcccctccaacattgacctatccacagagaccaattttgtgacgatggag
ttgtttggagtcacaaacctggtggagcaccctgctcagatcagccccccggtggacaca
gacaagccaggagtgactctgggagtgtacctgactaagaaggaacagaagaagctgagg
agacagactcgcagggagggacagaaagagctacaggagaaggtccgactggggctcatg
ccccccccagaacctaaagtgcgcatctctaacctgatgagagtgctgggcacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagcacagatggccaagagacagaag
gcccatgaggaggccaatgcagcccggaagctcacaactgagcagagaaaagagaagaag
gtgaagaagctgaaagaggacctgagtcttggagttcacatctcagtctataggatccgt
aacctccacaacccggctaagaagtttaaggtggaagctaacgccaaccagctgtacctg
acgggcaccgtggtgctacaccgagacgtcaacatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgaacagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggtc
tgggagggcacggctaaggagcgtaactacggggagattaagtttaagcagtgtcctaca
gagaacatggctagagaacactttaagaagcacgggacagaacactactgggacctggct
ctgagtcagagtgtgctggagagcactgatgactga
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