Salmo salar (Atlantic salmon): 106575165
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Entry
106575165 CDS
T04363
Name
(RefSeq) integrin beta-6-like
KO
K06589
integrin beta 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106575165
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106575165
09142 Cell motility
04820 Cytoskeleton in muscle cells
106575165
04810 Regulation of actin cytoskeleton
106575165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106575165
04515 Cell adhesion molecules [BR:
sasa04515
]
106575165
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106575165
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106575165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
106575165
NCBI-ProteinID:
XP_014006897
UniProt:
A0A1S3MUQ7
LinkDB
All DBs
Position
ssa17:8782804..8799283
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AA seq
786 aa
AA seq
DB search
MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPQCAWCSQENFTDSFLISERCDT
PYVLLERGCPQDLVEFPVTNSEVHKDQPLGKKTGNTNSTQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKNVLPLTSSTENFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYANFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKQCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGAPESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGVLCGGHGDCDCGGCVCQSGWTGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCERCPTCGDSCSSARICVECHLQAEDEATEECVQRCSIPHVFINNSTEYD
ESRSTLCTLKSENNCFISFSVVAGDIGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRNEIAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSTGGPKVDI
HPMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagcgcagtgacttgtgacgagtgtctccagctgggtccccaatgt
gcatggtgctcacaagagaatttcacagactcgtttttaattagtgagcgatgtgacacg
ccgtacgtcctcctagagagaggctgtccccaggacctggtagaatttcctgtgaccaac
tccgaggtccacaaggaccagcctctcgggaagaagacggggaataccaacagcacacag
atatcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaagagatg
gcaaagctcaccagtaaattcagacttggatttgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaaaacgtcctacccctcaccagcagcacagagaacttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaagctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgatgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcaaat
ttcatacctggtgccactgtgggggttctggaatcagattcaaggaacatcctcgaactg
attgtgacggcgtataaagagctgcggtctgagatagagctggaggtactaggagacaca
gaggatctacagatctccttcacagcgatctgtcaggatgggacagtactacctggacag
aaacaatgctccaacgtcaaagctggagacacggtctccttcaatgtgacggtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcaccagacccccgagcccaac
agcagccactgcagcctgggccgtggatctctggagtgtggctcctgtctgtgtgatccc
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgctccggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacgcgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggggtcctctgtggaggtcacggggactgtgactgcggcgggtgt
gtgtgtcagagcggctggacgggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaggtgccctacctgtggagactcc
tgtagctctgctaggatctgtgtggagtgtcatctacaagcagaagacgaggccacagag
gagtgtgtccaaaggtgcagcatccctcacgtcttcatcaataattccacagaatacgat
gagagccggtccacgctgtgtaccctaaagagcgagaacaactgcttcatctctttcagt
gtggtggctggagacatagggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgctgatctcggtccacgaccgcaatgagatcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagcacagggggaccgaaagttgatatt
catccaatggatggctactga
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