Salmo salar (Atlantic salmon): 106575212
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Entry
106575212 CDS
T04363
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106575212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106575212
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106575212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
106575212
NCBI-ProteinID:
XP_014007045
UniProt:
A0A1S3MVB0
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Position
ssa17:7239187..7250495
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AA seq
301 aa
AA seq
DB search
MLATGAAVTTALGQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPA
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcagctgtaaccacggctcttggccaagtggatagggaaaagatc
taccagtggatcaacgagctgtccagcccagagacccgcgagaatgccctgctcgagctc
agtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtgggact
atagctgctctcctgcaggaaattgtcaacatctacccctcaataaaccccccaaccctc
accgctcaccaatccaacagagtatgcaacgcattagcactcctgcagtgcgtggcctct
catccagagacaagatcggcatttctggcagcacacattcctcttttcctgtaccccttc
ttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctaggagtc
atcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacgacagaa
atcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggtagca
acttttattctacagaaaatactacttgatgacacagggctggcatacatttgccaaacg
tatgaacgcttctcccatgtggccatgatacttggcaaaatggttcttcagctctccaaa
gagccctccgctcgtcttttgaaacatgttgtccgctgttacctacgcctgtcagacaac
tccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagcttaaa
gacaccacgtttgcccaggtcctgaaggacgacaccaccaccaaacgctggttggcacag
ctggtgaagaacctacaggaaggccaagtcacagaccccaggggcatccctctgcctgca
cagtag
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