Salmo salar (Atlantic salmon): 106575260
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Entry
106575260 CDS
T04363
Name
(RefSeq) nibrin-like
KO
K10867
nibrin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03440
Homologous recombination
sasa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106575260
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106575260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
106575260
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106575260
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106575260
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106575260
BRCA1-C complex
106575260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
106575260
NCBI-ProteinID:
XP_014007149
UniProt:
A0A1S3MVD8
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All DBs
Position
ssa02:complement(7622988..7637287)
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AA seq
815 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPGKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNKERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLQ
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMTTGNSQALLPPTTKNTKKWADSVGRILQRKGLRFITESEIG
LAAIYVSCDKYCNPSNQMADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAVNT
EPSQGISGVDVAGVSAVGETPERNQSRTTSHLNRPKPSGRELAGTCTVAETMMSSFSASD
SAGGGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKGSP
QKQSALTNFFQPVGKKRPREGEESPTVPSEAKLSRREEDKEKMKRTVPQHSETSNPPHTG
PRANTAQVHICFQVRLRLCQRGSQTLPSRGYNPGRGRRWRWRLKGVGLQSEDMDESDEPM
SVSQGQRLKLTEQSSTNQGQRSQLTDKSSTNKRLLETVELTSANKKQRVYPVEPIAANHR
LGLESASRRQRAEPVAEVKGEEVSFIEGLGGENLPSRLIVVEFKSLTVATPARPKPRPME
THGNVNRKDFKRFCKVDPRMHLITTQGHGTLYPVPGAQGLPNIIGGSDLLAHNRGKNSEL
EEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccaggtaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacaaggagcgtctgtcaggagacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcaacaggtaactgtg
gttgtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcag
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagaaatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactccttgaatctccattgagctgtgtgatcggcatgaca
acggggaactcccaagcactactgccccccaccactaagaacactaagaagtgggcagac
tctgtggggaggattctacagaggaaaggtcttcgattcatcacagagtctgagatcgga
ttggctgccatctatgtcagctgtgacaagtactgcaatccctccaatcagatggctgac
tcagaatccatgaggatgaaacccaccatccctggcgccacgctatcccagaatgcacca
gtggatgagacggtaatgccagcggcgtctcagaacatcacagcctatgctgtaaacaca
gagccgtcacagggcatcagtggggttgatgtggctggggtgagcgcagttggagagacc
cctgagaggaaccagagccggaccacctctcatcttaaccgacccaaaccctcaggccga
gagctggccgggacctgcacagtggcagagactatgatgtcgtcattcagtgcctcagac
agcgctggtggtggcggctcggacagaaaaaagggagagctacaacatccaggtggaggg
aaaggtgatgctatcaccagattcctggccacagcccctcggaccaacggaggagtgcag
acgatgtccccacagaagcgctcctcccagaaacaacaggtctcgcagaaaggttccccc
cagaaacagtctgctctcactaatttcttccagcctgtcggcaagaaaagacctcgggaa
ggcgaggagtcccctactgtcccatcagaggccaagctctccaggagggaagaagacaag
gagaagatgaagaggacagtaccacagcactcagagacctccaaccccccacacacaggt
cccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtcag
aggggttctcaaaccctgcccagcaggggctacaatccaggaagaggaaggagatggagg
tggagactaaagggggtggggcttcagtctgaggacatggacgaatcggatgagcccatg
tcagtcagtcaaggccagcggttgaagctgacggaacagagttcaaccaatcaaggccag
aggtctcaactgacagacaagagctcaaccaataaacggctcctagaaacagtggaactt
acctctgccaataagaaacagcgggtttatccagtggaaccaatcgcagccaatcatagg
ttaggcttggagtcagccagcagacgacagcgagcggagcctgtagctgaggtcaaaggc
gaagaggtgtcttttattgagggtttagggggtgagaatctccccagcagacttatagtg
gtggagttcaaatccctcaccgtggcaacaccggcaagacctaaaccacgccccatggag
acgcacggcaatgtcaacaggaaagactttaaacgcttctgcaaggtagaccccagaatg
cacctcatcacaacacagggtcatgggactctgtacccagttcccggtgcccagggtttg
cccaacatcatcggagggtcagacctgttggcccacaaccgaggcaagaactctgagctg
gaggagtggctgagagacgcagcagaggatgagcgtcagaacaagaaagaggagactttg
ggagatgaccttttcaggtacaaccccaaacccaccaagaaaagatga
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