Salmo salar (Atlantic salmon): 106575308
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Entry
106575308 CDS
T04363
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106575308
Peptidases and inhibitors [BR:
sasa01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
106575308
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
106575308
NCBI-ProteinID:
XP_014007239
UniProt:
A0A1S3MVV6
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Position
ssa17:12675412..12701783
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AA seq
1220 aa
AA seq
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MSPSLYWFLLLCRLHSLWAQDHYSPYDKRIVDRRGKNKLLTTNVIPKNGQSLLNEGCGLE
LAFLVDSSESAKDNHAQEKMFTTDVVERLQGVKLQTGRALSSRAALLQFSSHVIIEQTFK
QWRGVANFKARIAPIRYIGHGTYTTYAITNLTKIYMEESEPGSVRVAILLTDGIPHPRNP
DIFSAVADAKNQGVKFFMVGITPAANDTSNVAQLRQLASSPANRYLHNLQDRDIVDKVIK
EITELADEGCPLDLKCACDKGERGPIGLQGKKGNSGDDGNPGVKGSKGESGLSGLPGRDG
EEGKPGYKGEQGERGECGTPGIKGDRGPEGPVGTRGNRGLQGLAGPNGDIGPEGLMGKKG
ERGLSGPPGIQGETGIGLPGPKGDVGFQGRLGPPGPPGLGEPGLPGPQGPQGIQGEKGPI
GEGFAGPKGDRGLEGPRGPRGQPGAGIKGDKGGFGPPGFPGPIGLPGLGIQGEKGIEGPR
GPPGGRGPQGDGYPGPKGDQGLPGELGSTGERGAGEPGAKGEPGASGLAGFPGLPGEDGA
PGQKGEPGVGGLRGPEGAAGIGTQGEKGDQGQRGIRGLGGPPGIAGPSGAKGEPGTPGRL
GMPGLPGRGIIGPKGDLGPPGPSGPLGETGYGLPGPKGDRGGPGPSGPFGPKGDGYPGPT
GTPGLPGLPGEPGLEGLGIPGPKGDIGFRGLPGLAGPPGEGLQGLPGGIGRQGPPGPTGP
PGQGIQGPKGEAGSQGVTGPRGPPGEGFPGAKGDRGSGGERGLKGVKGDLGDPGVPGQSG
RPGFKGDMGLTREDIIKMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVAA
LVDRVTVGRNATRIGLVLYSLEVKLEFNLARYMTKQDVKQAIRNIPYIGEGTHTGTAIRK
ATQDAFYSSRKGVSKVAIVITDGQTDKRESVKLDIAVREAHAANIEMYALGIVNTSDPTQ
SEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSKFCEDENGDLIYNRVTNGYRNGK
NGNYGNGNYGNGYGTTNQEDFNNGRRTVTTTGTQSQGGRVDLTQPINLGTATVQTGQRKG
GQDGGIYTPDWGTGRGDVPTLNRNTSSSSRESSSSNTRGSSSSSSSGTSSGTSSSSSGSS
GSVQLVPAPRPKLPKEFVPLDPRCALVLDQGPCRDYKMRWYYDKQANACAQFWYGACEGN
QNRFNTEEECKRTCVQERAG
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctctctgtactggttcttgctgctctgtagactccacagtctctgggctcaa
gatcactatagcccatatgacaaaagaatcgtggacaggagaggcaagaacaaactactg
acaaccaacgtcatacccaagaatggccaatcccttttgaacgagggctgtggcctggag
ctggccttcctggtggacagctcggagagcgccaaggacaaccacgcccaggagaagatg
ttcaccacagatgtggttgaacgcctgcagggggtcaagctccagacgggccgggctcta
agctcgcgagccgccctcctgcagttcagcagccatgtgatcatcgagcagacctttaag
cagtggaggggggtggctaacttcaaggctcgcatcgcgcccatcagatacatcggccac
ggcacctacaccacctatgccatcaccaacctgaccaagatctacatggaggagtcagag
ccagggagtgtcagggtggccatactgctgacggacggcatcccccaccccaggaaccca
gacatcttctccgccgtggccgacgccaaaaaccagggcgtgaagttcttcatggtgggc
atcacgcccgcggccaatgacacctccaacgtggcacagcttcgccagctggccagctcc
ccagccaatcgctacctacataaccttcaggacagggacatcgtggacaaggtcatcaaa
gagatcacagagttggctgatgaggggtgtcctctggacctgaagtgtgcgtgtgacaag
ggagagaggggacccattggcctccagggcaagaaggggaattctggagatgatgggaac
ccaggtgttaaaggatcgaagggtgagagcgggctcagtggacttcctggtcgagatggg
gaagagggcaagccgggctacaaaggagagcagggggagagaggagaatgtggcacgcct
ggaatcaaaggagacagggggcctgaggggccagttggcaccaggggaaacagagggcta
caggggttagctggtccaaatggcgatatcgggcctgagggtctcatggggaaaaaaggt
gagcggggactttctgggccacctggaatccaaggagaaactgggattggacttcctgga
cccaagggtgatgtggggttccaggggcgactggggcctccaggaccacctggcttaggg
gaacctggactaccggggcctcaagggccacagggcatccaaggagagaagggtcctata
ggagaaggcttcgccgggccaaagggggaccggggcctggaggggccgagggggcccaga
ggacagcccggcgctggaatcaaaggagacaagggtggctttggccctccaggttttcca
gggcctatcggcctgccagggctgggcattcagggggagaagggtatagaagggcctcgg
gggccaccagggggcaggggtccacaaggagatggatatccagggcccaagggtgaccag
ggcttaccaggggagcttggttcaacaggagagagaggggctggcgaacctggggctaag
ggtgagccaggagcgtcaggattggctggttttcctggcctcccaggagaggatggggcc
ccaggacagaagggtgaaccaggtgttggtggtctgagggggccagagggagctgcgggg
attggtactcagggtgagaagggagaccagggccagaggggcattcggggcttgggtggg
cctcctggaatcgctgggccctctggggcaaagggggagcctgggacaccaggtcgactg
ggtatgccaggacttccagggcggggcatcataggacctaagggcgatcttggcccacct
ggtccatctggaccattaggggagacaggctacgggctgcctggtcctaagggtgatcgt
ggaggtcctggtccgtctggtccatttgggcccaaaggcgatggttatcctggccctacg
ggaactcctggtctaccggggcttcctggtgaaccaggcctggaggggctgggcatccct
ggaccaaagggtgatattggcttcaggggcttgccaggtttagcaggcccccccggcgag
gggctacaaggtctaccgggtggcattggacgacagggcccaccagggccaacggggccc
cctgggcagggtattcagggcccgaagggcgaggcagggtctcagggcgtgacgggccct
cgggggccaccaggggaaggattcccaggggccaagggtgaccgtggctctggaggggag
aggggcctgaagggggtcaaaggtgatttgggtgaccctggagttcctggccaatcaggc
agaccaggattcaaaggcgacatgggcctcacaagagaagacatcattaaaatgatcaag
gagatttgtggttgcggaatcaaatgcaaggagcggcccatggagctggtgttcgtcatt
gacagctcggagagcgttgggccggagaactttgagatcatcaaggactttgtggcggcc
ctggtggaccgcgtgacggtgggccgcaacgccacccgcatcggcctggtcctctacagc
ctggaggtcaagctagagttcaacctggcgcgctacatgaccaagcaggatgtcaaacag
gccatacgaaatatcccttatataggtgagggcacccacacaggcaccgccatccgcaag
gccacccaggatgccttctacagctctcgcaagggggtcagtaaagtggctatagttatt
actgacggacagacggataagcgggagtcggtgaagctggatattgcggtgcgggaggcg
catgcagccaacatcgagatgtacgcattggggatcgtgaatacgtcggaccctacgcag
tccgagttcctgagggagctcaacctgatcgcgtcagaccctgatagtgaacacatgtac
ctcattgatgacttcaacacgctgccagctctggagtccaagctcgtcagcaagttctgt
gaagacgagaacggtgatctgatatacaaccgtgtcaccaatggatataggaacgggaag
aacgggaactatggcaatgggaactatggcaatggctatgggaccaccaaccaggaggac
ttcaacaatgggaggcgaacagtcaccactaccggcactcaaagtcagggtggcagggta
gacctaacacagcctatcaaccttggcaccgccacagtacagacaggacagcgtaaggga
ggccaggatggaggtatttacaccccagattgggggactggtcgtggggacgttcccacg
ttgaaccgcaacacgtcctcctcctccagggaatcctcatcttcaaatacaagagggtcc
tcttcctcatcatcatcaggaacgtcatcaggaacgtcatcttcatcctcagggtcctca
ggctctgtccagttagtgcctgcaccacgacccaaacttcccaaagagtttgtgcctctg
gaccctcgctgtgctctggtcctagaccagggcccatgtcgggattacaaaatgcgctgg
tactacgacaagcaggccaatgcatgcgcccagttctggtacggagcctgtgaggggaac
cagaaccgcttcaacacagaggaggagtgcaagaggacatgtgtgcaagaacgagccggc
tga
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