Salmo salar (Atlantic salmon): 106575326
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Entry
106575326 CDS
T04363
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106575326
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106575326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
106575326
NCBI-ProteinID:
XP_014007281
UniProt:
A0A1S3MX07
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Position
ssa17:complement(13097144..13108192)
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AA seq
897 aa
AA seq
DB search
MGLKDHAEEDAAGRIPDLGLDLEYLHIEGSVSRKAGADTGPSVERGEEEEEACEGSGSCS
LSTPGGKGGEVVGEESAGFDSDPEPARNSTGSNPAGGVSVSELDGGVPVPNTHQPLCRTP
CVDLGSEGPPDPPSGEPSPGAALREYQSKLEFALKLGYAEELVRLVLAKLGPYTLINNIL
GELVKLGRKAETNQQLTLSTASQPAPSACSSSSSTSTCGYVEAVEAQQGRSDSPYQTDFL
LGDKDNLRPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLERGHRDITVFVPSWKKEQSR
PDALITDQDILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRD
LASEKPEWKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIMPEHKKQPCPY
GKKCTYGHKCKYYHPERSAQCQRSVADELRASAKTSATSTSAKGQAGEAGLVKSHSVPNN
VAMGTKRGSAPKRQCDPSIRALSYGEAEDKLRHAEKCNSLSSSSGSSCCSGSVILSPAPG
GPPSSALSDPQEQPPSLGRDTPYMTLPPPHPDPYSSSCDSPDQSYYSVTPAHSGLAARRS
PVSRFPLDTDLRLLGSSDCGNSGCDSYGERASCLCCPGPLLDKYIHHQHHRHHQHNRLYS
QHSAPLLDPQPSPHTSVLHGYHQSLARGHSFPHHEPPDPHLKRPLYPLPPPLQHQAVGAR
SSCPGDYPSVSQSGPYPAGSPLGRCLANTRLETLSDSRLYERSPLPKAFSWDPYCSQLPQ
SHYEAYQSLPETHDVGWGHTSPWGQTTHSYHPPHPPYPSQPPHPSHAPQPSHPSMPPHHM
QQEPPALSWCGEVRGKVYLNLCNIFPSELVGRVMGRNPQVTDAQQLAAAILAEKSGY
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatgcggaggaggatgcagcaggccgcatcccagacctggggctg
gatttagagtacctccacatcgaaggctccgtcagcaggaaggctggcgccgatacagga
cccagtgtggagcggggcgaggaggaggaagaggcctgcgagggcagcggcagttgcagc
ttgtccacgcctggggggaaggggggggaggtggtgggggaggagagcgctgggttcgac
agtgacccggagccagcccgaaacagcaccggttctaacccggctggaggagtgtccgta
tctgagcttgatggaggtgtgcctgttcccaacacccaccaacctctgtgcaggactccc
tgtgtggacctggggtccgaggggcctcctgaccctccgtcgggggagccttcacccggg
gcagccctgagggagtaccagtccaagctggagtttgccctgaagctgggctacgccgag
gagctggtgcggctggtgctggccaagctggggccgtacacgctcatcaacaacatactg
ggagagctggtcaaactgggccgtaaggccgagacaaaccaacagctgactctgtccacg
gcttcacagcccgccccctccgcctgctcctcctcttcctccacttctacctgtgggtat
gtggaggcagtggaggcgcagcaggggaggtcagactccccctatcagacagacttcctc
ctgggggacaaggacaacctgcggcccgtcgtcctggacggtagcaacgtggcaatgagc
catggcaataaggaggtgttctcctgctacggcatccagctggctgttgattggttcctg
gagcgaggtcaccgtgacatcactgtgtttgtgccgtcctggaagaaagagcagtcccgc
cctgatgccctcatcacagaccaggatatcttacgtcgtctggagaaggacaagatcttg
gtgttcactccatctcgtcgggtccagggtcgccgggtggtctgctacgacgaccgcttc
atcgtcaagctggcctacgagtccgacggcatcatcgtctccaacgacaactaccgcgac
ttggccagtgagaagccagagtggaagaagttaattgacgagcggctgctcatgtactcg
tttgtcaacgacaagttcatgcctcctgatgaccctctaggtcgtcatggtcccagtctg
gagaacttcctgaggaaacgtcccatcatgccagagcacaagaagcagccctgtccttac
ggcaagaagtgcacttacggccacaagtgtaagtactaccacccggagaggagtgcccag
tgccagcgctcggtggcagacgagctgcgtgccagcgccaagacctctgccacctctact
agcgccaagggccaggctggcgaggccgggctggtgaagagccacagcgtgcccaacaat
gtagcgatgggcaccaagagaggttctgcccccaaaaggcagtgtgaccccagcatccgg
gcgctgtcctacggcgaggcagaggacaagctgagacacgctgagaaatgcaacagcctc
agtagtagtagtgggagtagttgttgtagtgggagtgttattctgtcccctgcccctgga
ggacccccctcctctgccctcagcgacccccaggaacagccaccgagcctgggcagggac
acaccctacatgaccctgccgcccccccaccctgacccctactcctccagctgtgactct
ccagatcagagctactactcagtgacaccggcccactctggcctggcagcacggaggagt
ccggtgtcccgcttcccgctggacacggacctgcgtctgctgggctcgtcagactgtggc
aacagcggatgtgactcgtacggagagagagcctcctgtctgtgctgccccggtcctctg
ctggacaagtacatccaccatcagcatcatcggcaccatcaacacaaccgcctgtactct
caacactctgcccccctgctcgacccccaaccctccccacacacctctgtcctccatggc
tatcaccagagcctggcacggggccacagcttcccccaccacgagccccctgacccccac
ctgaagcgccctctgtaccccctcccgcctcccctccagcaccaggccgtaggcgcccgc
tccagctgccctggagactacccctctgtgtcccagtccggcccctaccctgctggctcc
cctctgggccgctgcctggccaacacgcggctggagacgctgtcagactcccggctgtac
gaacgctccccgctgccgaaagccttctcctgggatccctactgcagccaactccctcag
tcccactatgaggcctaccagagtctcccagagacccacgatgtaggctggggacacaca
tctccatggggacagaccacacactcttaccacccccctcacccaccctacccctctcag
ccccctcacccatcccatgcccctcagccatcccacccgtccatgcccccccaccacatg
cagcaggagccccccgccctgagctggtgcggggaggtgcgggggaaggtctacctcaac
ctgtgtaacatcttcccctctgagctggtgggccgggttatggggaggaacccccaggtg
accgacgcccagcagctagctgccgccatcctggctgagaagtccggctactga
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