Salmo salar (Atlantic salmon): 106575482
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Entry
106575482 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106575482
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106575482
04082 Neuroactive ligand signaling
106575482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106575482
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106575482
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
106575482
NCBI-ProteinID:
XP_014007470
UniProt:
A0A1S3MWI5
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Position
ssa17:16941590..16968186
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AA seq
1293 aa
AA seq
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MQHPLDFACRHKATRHGWKVVWKRGAQNRFHLQMSVRVPPSRLANLLLSVLQGVEGETEG
EGRRQGGGRGQEGGRGGVAVVCPGWEERGEGLLKHLETQKGTSWSLLDLINLTHIGGEEK
REERWKEERREERGKEERREERGEEERGAERGEETSDETREDKREAEVLSLLSHRLLRSA
SPLSSVVILGSDPECLSSVLRCAQRLAPSLPTLQWIMGNPLSPDSLLSLGGPLGLLAYGE
VGRKPITFYIRDALRLIGQAVTSASEVSPDLALIQNMVNCYDKPNKEEVPSSGQYLARFL
SNTSFQGSTGAVRVAPALSQVLSSQLYHVWSLKRGPLGQPSWVTVAHWTTGRLQLDEGVL
GLGVEAGLGLGPGRRTGSGSGLGVQSGDRDRDNSPGGRWRPGLQMAGRRLRVVTLVEHPF
VFTREVDEDGLCPAGQLCLDPRTNRSYLLDSLFCHLHQTNTTATTTDHNPTEDLRKCCYG
YVIDLLEKLSEDLKFTFDLYIVGDGKYGAMSSTGSWSGLVGDLLSGTADMAVTSFSINSA
RSRVIDFTSPFYSTSLGILVRSQDTSAPIGAFMWPLHWSMWVGIFVTLHLTALFLTVYEW
NSPFGMTPHGRNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTSRFLMNLWAIFCLLVL
SSYTANLAAVMVGEKTFEQVSGIHDEKLHHPSRGFRFGTVRESSAEDYMRKSFSAMHDYM
RRYNQPTTPDGVDMLKTDPPLLDAFIMDKALLDYEVSIDAECKLATVGKPFAIEGYGIGV
AQGSPLTANVSEFISRYKSEGYMDILHEKWYKVVPCGKRVFTNTENLSMGIDHFSGLFVM
LCVGVVGAIFTLAAEHTFYHLALPRLRRSHTLTYWLHTSQKIHRALNTPYEDVGKELIGL
DHNPSPCVSDSCSLHRHRQPRPPPPLSSPLPAPPPPQPSSPARDIKENKRVHFDLESLHS
YRLHTHTASFRGRPGMVGRHGLGGCLGGLSPPQVSLHANGGPASALASPGLALPPLGNPG
GQAFLWEGELQEVQGRIETFTAQLRDAVARRAEIQTCLENHKMNQSTATAVKLEKDMVGQ
SQCLERVRTNAEKDKNKEEREGLNQEKGRSGRSNLCCSLDRNRDRDRTGRDHSTVRQTAR
QDTDRDRLLHQSKTERDRDDQSKSLDRNGSSQSHASNFLQTGRNSQSEALNILQRRIEIQ
SKTSTSLDRETTNQSRAVNTLQGERTVQSRNSTSLERGRARQSGAVKDQERGRTVQTRTG
ASLDRLRASQSSAGTGNLVRERPAPMDTQKSLC
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatccccttgactttgcctgtaggcataaagcaacaagacatggttggaaagta
gtctggaagaggggagcacagaaccggttccatctccaaatgtcagttcgtgttccaccc
tctcgcctggccaaccttctgctctctgttctccagggggtagagggggagacagagggt
gaagggagaagacaggggggaggcaggggtcaggaagggggtagagggggagtcgctgtg
gtgtgtcctggatgggaggagaggggggagggactactgaaacatctagagacacagaaa
ggaacaagctggagtctactggatctcatcaaccttacacatataggaggggaggagaag
agggaggagagatggaaggaggagaggagggaggagagagggaaggaggagaggagggaa
gagagaggggaggaggaaagaggggctgagagaggtgaagaaacaagtgatgagaccaga
gaagacaagagggaagctgaggtcttgtctctcctctcccatcgtcttcttcgctccgcc
tctcctctctcctccgtggtcatccttggttccgacccagaatgtctctcttctgtcctc
cgctgcgcccagcgtctcgctccctcgctccccacgctgcagtggattatgggtaaccct
ctgtcacctgactctctcctctcgctgggcgggcccctcggcctattggcttatggagag
gtgggtcgtaagcccatcaccttctacatccgagacgcgctgcggttgattggccaggcg
gtgacgtcggccagtgaggtgagcccagacctggctctgatccagaacatggtcaactgt
tacgacaaacctaacaaagaggaagtgccctcgtctggacagtacctggccaggttcctc
tccaacacgtcgttccagggttctacgggcgcggtccgtgtggcacctgctctctcccag
gtcctctcctcccagctgtaccacgtgtggagcctgaagagaggtcctcttggccagcca
tcctgggtcaccgtggcccactggaccaccgggcgcctacagctggacgagggggtgttg
gggctgggggtcgaggctggcctgggactaggcccggggagaaggacagggtccgggtct
gggttaggggtccagagtggggatagggacagagacaacagtcctggagggagatggagg
ccggggctacagatggcgggccggagattaagggtggtgaccctggtggagcatcccttc
gtgttcactagagaggtggatgaggatgggctgtgtcccgctggtcagctctgtctggac
ccgaggactaaccgctcatatctactggactcactgttctgtcacctgcaccagaccaat
acaactgctaccactactgaccacaacccaacagaggacctgcggaagtgttgctatggt
tacgttattgacctgttggagaagctgtcggaggacctgaagttcacctttgacctttac
atcgtgggagacgggaagtacggagcgatgagcagcactgggagttggtccggtctggtg
ggagacctgctgagtggaacagcagacatggctgtgacatcattctccatcaactcagcc
aggagcagagttatagacttcacctctccattctactctacctctctggggatactggtg
cgtagccaggacacatcagcccctattggggccttcatgtggcctctccattggtccatg
tgggtgggcatcttcgtcactcttcatcttaccgcactcttcctcaccgtctatgagtgg
aacagtccctttggtatgactcctcatggcaggaacagactcagagtgttctcctactcc
tcagccctcaacctctgttacgccatcctgtttggacgcactgtcgctactaagactcct
aagtgttggaccagtaggttcctgatgaacctgtgggctatcttctgtctgctggtgttg
tccagttatacagctaacctggctgctgtcatggtgggggagaaaacctttgaacaggtg
tctgggattcatgatgagaagctgcaccacccatcccgtgggttcaggtttgggacagtc
agagagagctctgcagaagactacatgaggaagagtttctctgccatgcatgactacatg
agacgttacaaccaacccaccacaccagacggagtggacatgttaaagacagatcctccc
ctactagatgccttcatcatggataaagctctattggactacgaagtctccatcgatgct
gagtgtaaactagcgactgtgggcaagcctttcgctatagaggggtatggtataggtgtt
gcccaaggctctcctctcactgccaacgtgtctgaattcatcagtcgctacaagtcagaa
gggtacatggacatattacatgagaaatggtacaaggtggtgccatgtgggaagcgagta
ttcactaacactgagaatttgtcgatggggatagatcatttctcaggcctgtttgtgatg
ttgtgtgtgggggtggttggagccatctttaccttggcagctgaacacaccttctatcac
ctagccctgccccggctacgacggtcccacacactcacctactggttgcataccagccag
aagatccatcgagccctgaacaccccttacgaggacgtagggaaagagttgattggcctg
gaccacaatccctccccttgtgtctctgacagctgcagcctccacagacaccggcagcct
cgccctcctcctcccctgtcttcccccctgcctgccccccctcctcctcagccctcctct
cctgcccgggacatcaaggagaacaagagggtccactttgatctggagagcctacacagc
taccgtctacacacacacaccgcctcgttccggggacggcctggcatggtggggcgacac
ggcctgggagggtgtctgggtggtttatctcctcctcaggttagcctgcatgctaacggt
ggcccagcatcggccttggcctcccccggcctggccctgcctcctctggggaacccaggc
ggccaggccttcctgtgggagggagagctccaggaggtccaggggagaatcgagacgttc
acagcccagctgagagacgccgtggccaggagggccgagatacagacctgcctggagaac
cataaaatgaaccagagcacagctactgctgtcaaactggagaaagacatggttggccag
tcacaatgcctggagagagtgagaaccaacgcagagaaagataaaaacaaggaagagaga
gaggggctcaaccaggagaaaggaaggagtggcagatcaaacctctgttgcagcctggac
agaaacagagacagagacaggacaggcagggaccattccactgtgagacaaacagccaga
caggacacagatagggacagactgttacaccaatcaaaaactgagagagaccgagacgac
caatcaaaaagcctggacagaaatgggagtagccaatcacatgcctccaactttctgcag
acagggaggaacagccaatcagaagctctgaacatcctacagaggaggatagagatccaa
tcaaaaacctccaccagcctggacagagagacaaccaaccaatcacgtgctgtcaataca
ctgcagggagaaagaactgtccaatcacgtaactccaccagcctggagagaggaagagcc
aggcagtcaggtgcagtgaaagaccaggaaagggggagaactgtccaaacacggacaggg
gctagtctggacagattgagagctagccaatccagcgccggcactgggaatctggttaga
gaacgtcccgcccccatggacacccagaagagcttgtgttag
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