Salmo salar (Atlantic salmon): 106575732
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Entry
106575732 CDS
T04363
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106575732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106575732
03021 Transcription machinery [BR:
sasa03021
]
106575732
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106575732
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
106575732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
106575732
NCBI-ProteinID:
XP_014007870
UniProt:
A0A1S3MXQ8
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All DBs
Position
ssa17:24181472..24190065
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AA seq
631 aa
AA seq
DB search
MADGGVMSQYESSGPDSIINLSVSSKSNMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANLLQTPTITIAPQAAAPTRTITATPGQLLIHSQTPPPKGLGTPTLEDASDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSLSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLASATGNTASVISSTPTVPSMSLTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPSLMPSSQFNTGGALLNLTTAGFGGALATIQGV
LSALASSGSFPMTTLDGNGNLLFANTSMPGSAPSMVNTPLFLNPQSLSLLGSNPVSFIPA
SALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagactcgataatcaac
ctgtcagtatccagtaaaagcaacatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggactctcagaagcagactgtcatgtccctcaccaatgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactccgccagccaggcccagaacagcagc
accacgggggctgccatttctgcctccgcagccacccccatcaccacccaactcccactg
tcccagcctatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatctcccagactcca
cagggacagcccagtatgtttcagtatcataatctcctgcaagcccaaaatcttctcact
caactacctcagagccaagccaacctcctacagactccaactatcacaatcgctccacag
gcggccgctcccacgcggaccataactgccacccccggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggacgccagtgatctggaagag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggcttcacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgcaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcactcagcctggcgtctgacctcaatagccggcgccgcaagaag
aggaccagcatcgacaccaatatccgcgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaatcctcccagc
agctcggctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgaccgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggcgtcagccaccggcaacacagcatccgtcatctccagcacccctaca
gtcccctctatgtccctcacaccctcctcctccgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcagatgctctacagcaacggcgggggtctggctgcaatggcg
gctgcagcggcgggaatcagcccgagtctcatgccctcatcgcagttcaacacagggggg
gccttactgaacctaaccactgcaggttttggaggagcgctagccaccatccaaggtgtg
ttgagtgctctggcctccagcgggtccttccccatgaccaccctggacgggaacgggaac
ctgctatttgccaacaccagcatgcctggctccgcccccagcatggtgaacacgccccta
ttcctgaacccccagagcctgtccttattgggtagtaaccctgtcagcttcatccctgcc
agtgccctcagcctgcaactcaccgctggcaccaacaccatcaccacggcaaccacacca
gtcaacaccatcgtcagagcctctaaggcccaatga
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