Salmo salar (Atlantic salmon): 106575909
Help
Entry
106575909 CDS
T04363
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106575909
09124 Replication and repair
03420 Nucleotide excision repair
106575909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106575909
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106575909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106575909
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
106575909
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106575909
TCR (transcription coupled repair) factors
Cul4-CSA complex
106575909
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106575909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
106575909
NCBI-ProteinID:
XP_014008104
UniProt:
A0A1S3MY12
LinkDB
All DBs
Position
ssa17:28719643..28742051
Genome browser
AA seq
757 aa
AA seq
DB search
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRNHI
VSDGAVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQYKQYTQNQSEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKSPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatacgacaggacaagaaagcaaacttctctgctctgacggagcacaac
aacaacggagtgacgaagatttctggcctggcctccaacaaaactggcgcctccaagaaa
ttagttattaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacaca
tggctgaagctgagggatgcggtaggagccatccagaatagcacctccatcaagtacaac
ctagaggaactctaccaggcggtggagaacctgtgttcgtataaagtctcccctacactc
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgctggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggatcgtacctacgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggaaccacatc
gtgagcgacggggctgtccagaagcgcacggtcgatgggatcctggaacagatcgaacgt
gaacgcaacggggagaccgtggaccgcagccttctccgcagcctactgggcatgctctca
gatctgcaggtgtataaagagtcgtttgaggagcgttttttgatggagactaacagactg
tacgctgcagagggacagaggctgatgcaggaacgagatgtgccggagtacctgcatcac
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctacctcgaccagagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagatggtaaccgggtgatggagctggctctgctc
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaggataaggacatggtt
caagacctgttggactttaaggataagatggacaacgtggctcagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaaattgcgggcgggcaacaag
gaagctaccgaggaggagatggagaggattctagacaagatcatgatcatcttccgcttc
atccatgggaaggatgtgttcgaggccttttataagaaggaccttgccaaacgcctgctg
gttgggaagagtgcctccgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgtcatgatccagtacaaacagtacacccagaaccagagtgagcccagccagctggag
ctaacagtcaacatcctcaccatgggctactggccctcctacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctgaagactgagttt
aaagagggtaagaaggagctgcaggtctctctgttccagacgttggtgctactgatgttc
aacgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataaaagt
ccccgggggaaggacatagaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggtggaggagcaggtg
agcaccactgagcgtgtgtttcaggacagacagtaccagatcgacgcggccgttgtacgc
atcatgaagatgaggaaaactctgggccacaacctgttggtgtcagaactatacaaccag
ctcaagttccctgtcaagcctggagacctgaagaagcggattgagtcgctgatcgacaga
gactacatggagagagacaaggagagtcccaaccagtaccactatgtggcctga
DBGET
integrated database retrieval system
