Salmo salar (Atlantic salmon): 106576139
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Entry
106576139 CDS
T04363
Symbol
casc1
Name
(RefSeq) cancer susceptibility candidate 1
KO
K17580
cancer susceptibility candidate protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106576139 (casc1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106576139 (casc1)
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106576139 (casc1)
Cilium and associated proteins [BR:
sasa03037
]
Motile cilia and associated proteins
Dynein arm
106576139 (casc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
Motif
Other DBs
NCBI-GeneID:
106576139
NCBI-ProteinID:
XP_014008527
UniProt:
A0A1S3MZC3
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Position
ssa17:39496928..39504994
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AA seq
741 aa
AA seq
DB search
MPSKDAKSAQKKGGKLSKAEKEQLQKEEDERREKEEEEARLLAEKEEQERLERERKEQEE
NQRLELKDKDRREDELNELRHLLEENQTAVTKWETDSRAKAKWDRYMRCDGSPDPSVQQE
INTFINLWWEDPEVQIKPVLKECALALRLLEELEGMLRDQPEPADALRYKETLLSIQTLI
QSKLDHSTEEILKSANAHSDIETGNMQTVVQDDIITLCLWANLNKNPRFKGFQFEEVGLG
FELPKQLAISDVAVRILHTNYDHLSHLANLKSQNPSRMSLGLGAREEPLLEGATPVGECG
ETEGDGDRRGSTQQGNADEEVQSVRGSEGRKSAVSVISMKEERRSGQKQLEDAKQKLEEN
GSQIDTMLEGDDSGEGDSAPTPMEPVINSYEGQVVDLQQYTPLGGVFYCDVFRLPPQSQQ
LNGWEMRELLDTGLQPFPYPTEQTQIQGSASMKLEDSGVLTCPPVGVTVTLPDSVLFLED
PQVARWDPEGQHWKTDCISETSYDQAERKISFKMDSFYAFTLLQDSYANMPFQSWELRPL
GQDSALLTITAALTEVSITIKGSKCMLQSDQERGLNHILGQWMSPSQLQKAMVSAGVNIF
VNQYSDKYVSVNAKDPLLEHTVYEQMALLSSAFAFSWSQWNTQCGHEHLVLQVCEHLDPV
PVREDSWCVYLLGARRSQRLRIKEHSEAFSPELDPGSEFHSTFLHMLRDGMSPAGQERRS
HHLFVEAVHRLLRATRPLTYS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaaggatgcaaagtctgcccaaaagaaaggaggcaagctcagtaaggctgaa
aaggagcaacttcagaaagaggaggatgagagaagagaaaaggaagaggaggaggctcgg
ctcctggctgagaaagaggagcaagagaggctggagagagagagaaaggagcaggaggag
aatcagagactggagctaaaggacaaagatcgcagagaggatgagctgaacgaactgcgt
catctattggaagagaaccagactgcagtcaccaagtgggagactgactccagagcgaaa
gccaagtgggacaggtacatgcgttgtgacgggagtccagacccgtcagtccagcaggag
atcaacaccttcatcaacctgtggtgggaggacccagaggtccagataaaaccggttcta
aaggagtgtgcactggctctacggctgctagaggagctggagggtatgctgagggaccag
cctgaaccagctgatgccttgaggtacaaggagaccctgctctccatccagactctcatc
caatccaaacttgaccacagcactgaggagatactcaagtcagccaacgctcactcagac
attgagacggggaacatgcagacagtggtccaggatgacatcatcacactgtgtctgtgg
gccaaccttaacaagaacccaaggtttaaagggttccagttcgaggaggtgggactgggc
tttgagctgcccaaacagctggcaatcagtgacgttgctgtgagaatcctccacaccaac
tacgaccacttgtctcacctggccaacctgaaaagccagaaccccagcaggatgtccctg
ggcctgggggccagggaggaaccccttctggagggagcgacccccgtgggggagtgtggg
gagacggagggagatggtgacaggagagggagcacacagcagggaaatgcagatgaagag
gtgcagtctgtcagagggtctgaaggcaggaagagtgcggtgagtgtgatatctatgaag
gaggagaggaggagtggtcagaagcagctggaggatgcgaaacagaagctggaggagaat
gggagtcagatagatacaatgttagagggagatgactcaggtgagggagactccgcccct
accccgatggagccagtgattaacagctatgagggtcaggtggttgacctgcagcagtac
acgcccctaggaggagtcttctactgcgatgtcttccgtctgccgccacagtcccaacaa
ctcaatggatgggagatgagagagctgttggacacagggctgcagccgttcccctacccc
acagagcagactcagatccagggctctgcctccatgaagctggaggacagtggggtcctg
acctgtccccctgtaggggtcacagtcaccctgcctgactctgtcctgttcctggaggac
ccccaggtggcccgctgggaccctgaaggtcagcactggaagaccgactgcatcagtgag
acgtcgtacgaccaggcagagcggaagatctcgttcaagatggactcattctacgccttc
acgcttctacaggactcgtatgccaacatgccgttccagagctgggagctcagaccactg
ggccaggactctgccctgctcaccatcaccgcagccctcactgaagttagcatcaccatc
aagggcagcaagtgtatgctccagtcagaccaggagagaggactgaaccacatcctgggc
cagtggatgagtccttctcaactgcagaaagccatggtcagcgccggggtcaacatcttc
gtcaaccaatactccgacaaatatgtcagcgtaaacgcaaaggaccctctgctagaacac
actgtgtatgaacagatggccctgctttcctctgccttcgccttctcctggagccagtgg
aacacgcagtgtgggcacgaacatctggtgctgcaggtgtgtgagcacctggacccagtc
ccggtccgagaggactcgtggtgtgtgtacctgctgggggcccggaggagccaaaggctg
aggatcaaggaacatagtgaggcgttctctccagagctggaccccggcagcgagttccac
tccaccttcctgcacatgctccgagacggcatgtcccccgccggacaggaacgacgctct
caccacctgttcgtcgaggccgtacacagactgctgcgtgccacacggcctctcacatac
tcctga
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