Salmo salar (Atlantic salmon): 106576165
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Entry
106576165 CDS
T04363
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106576165
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106576165
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
106576165
NCBI-ProteinID:
XP_014008602
UniProt:
A0A1S3MZJ6
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Position
ssa17:40521906..40530948
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AA seq
960 aa
AA seq
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MNTVGDTKCAHIGEDLNMVQLSPSPARDVSPSPECSEKGRQGSPKAASPKMGSPGGLSSL
QLALAASTNIYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAV
EKYDEVIHNLQFAQELHKTLGGLTQELLKAQKKALKKEQMAKQEVEKRRLCVVLQVKFLL
QTLLQHEHIRKDLLSARNPQLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDL
LEGKNKAVAGTTYKVLKAKLAKLMDCGYFDCVPPPPSNSPKEVEVPMTKKTVSQTASLST
LMTSNQKDMPSREFLNRHYLPDTDPNGCRDTPVTQNWKAEFQAMKEQEPPDSWDMESDST
QPVIQKPWRGAAVFISKVPVTTKKQNAEPKQRRVKSKRERDATAALRVDTPVEVFNSQSS
LPKDPILRKQQLEDLMTKIRGSFSFMQDSLLDGQGSPTNGHPRLGRRASGSPSPLVQRES
RRSPVDHLPKTLHSTPLPSKLLPVDDEPNLTNGEGGCLESCDLDLTTEDLAHVITIDPCL
LLSESETACPSPPPFYRRESSMSITLDEKTSTRTTISESGKQSPCNGVVPPCTPTPTPTQ
GQLFSTPPSRRTLSMVPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSNDLCYVTTST
QTPPEFAPLEDEHLQSVNQSECLVGSGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGG
KGLAHSYFRSSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNGGWSDSSQVSS
PDREGNYSLVDSAHGDSLQGVGMDLTPQVTPHALMHVPMYPLPQHPQPLRVAFTAARTAN
YTPGTLDQPIAFDQLHSNLGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRN
DEVMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgtcggcgacacaaaatgcgcacacattggcgaggatctgaacatggtgcag
ctgtctccatccccagcccgggatgtgtccccttcacctgagtgctccgagaaggggagg
caggggagcccgaaggcagctagccccaagatgggctcccctggtgggctgagttctctc
cagctagccctggcagcctccaccaacatctaccagggctacgagagttacatcgaggac
ggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggag
gactacaggaagcgtttgaaacatggggaatcactcaatcaagaccagatagatgcagtg
gagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcacaagaccctt
gggggtttaacacaggaactgctaaaggcccagaagaaggcattgaagaaggagcagatg
gccaagcaggaggtagagaagaggaggctgtgcgtagtgctgcaggttaagttcctcctg
cagaccctgctgcagcacgaacacatcaggaaggacctcctctctgcccgcaacccccag
ctccaggttgcagagctacagagcctgcttgagctcgctgaactactgggggtgaagagg
gacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctatctggacctg
ctggaggggaaaaataaagcagtagccggaaccacctacaaggtcctgaaggctaagttg
gcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaatagtccc
aaggaagtagaggttcccatgaccaagaagacggtgtctcagacagccagcctctctacc
ctaatgacgtcaaaccaaaaagacatgcctagcagagagtttcttaacagacactacctg
cctgacacagaccccaatgggtgtcgagacactcccgttactcagaactggaaggctgag
ttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtcggactccact
cagcctgtaatccagaaaccatggagaggggcggctgtcttcatctccaaagtgccggtt
actaccaagaaacaaaatgctgaacccaaacagagaagagtgaagtctaaaagggagcgg
gacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttcc
ttgcccaaggaccccatcctgcgcaagcagcagctggaggacctgatgaccaagatcaga
ggctccttcagcttcatgcaggattctcttctggatggacaaggatcacccactaacggc
catcctagactgggccggcgtgcctctggatccccctctccactcgtacagagagagtca
aggagaagcccagtggaccatctccccaaaacactgcattccactccattgccttctaaa
ctcctccctgttgatgacgaacccaatctgaccaatggcgaggggggttgtctagagagc
tgtgacctggacctaactacagaggacctagctcacgtcataaccattgatccatgtctg
ctgctgtctgagagtgagactgcctgcccctctcctcctcccttctaccgtagggagtct
tccatgtccatcaccctggatgagaagacctctactcggactaccatctctgaatctggg
aagcaatccccctgtaacggggtggtgcctccttgtaccccaacccccacccccacccag
gggcagctgttttctacccctcccagcagacgtacactcagcatggtcccctctgttccc
ttccagaccatgcattcggtattcaaggtgaacgcccccttacttccgactggagacttt
aaatctgatattatcccctattcggactccaacgacctgtgctatgtcaccaccagcacc
cagaccccaccagagttcgctcccctggaggacgaacacctacagtcagtgaaccagtct
gaatgtctggtgggtagtggtgggcagatcttcctgtcccctagccaatcaggtggcacc
atgggccgttctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggc
aaggggctggcacactcctactttcgctcttctggtgggcacagaggaggaagcttcatc
ccccaggctcacttgtacggcgctcgggacactggctaccagcacagctacaggcgtggt
ggaggcaatgcaggacaaaggcacaatggtggttggagtgactcctcccaggtgagcagc
ccagaccgggagggcaactactccctggtggactccgcccacggcgactcactgcagggt
gttggcatggacctcaccccccaggtgacccctcatgccctgatgcatgtacccatgtac
ccgctcccccagcatccccagcccctccgtgtggccttcacagcagcccgcacagccaac
tacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctgggg
gaaatgttcaacaccaatgtgggtcgtttcacctgcccagccaacggcacctacgtcttc
ctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaac
gacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccatgagacggccagc
aaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgcggc
tctatctatggcagcagctggaagtacagcacattctctggcttcctgctctaccaggac
tga
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