Salmo salar (Atlantic salmon): 106576238
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Entry
106576238 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106576238
04131 Membrane trafficking [BR:
sasa04131
]
106576238
04121 Ubiquitin system [BR:
sasa04121
]
106576238
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106576238
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
106576238
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106576238
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106576238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-RING_5
P53_TAD
zf-C3HC4_3
DZR
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106576238
NCBI-ProteinID:
XP_014008774
UniProt:
A0A1S3MZX8
LinkDB
All DBs
Position
ssa17:43656711..43662023
Genome browser
AA seq
489 aa
AA seq
DB search
MKNTFGDNDLQGTDGSGSLGGPDVRRRIPIKLISKPTIRSKPAPRTQRPMGRQPSKPQAG
DEESFSFKQEERFDCGTKAGDVFASQRRFPQQMFWDFKLNLIGEKDDIPAHFCDKCGLPI
RIYGRMIPCKHVFCYECALLHEKKGDKMCPGMQLFSCTDPVQRIEQCLRGSLYMCSIVKG
CKRTYLSQRDLQAHINHRHMRAAKALASRQDALHLPPSTEVPDRFRVPPPHLPKTQGHLP
PPLQHGGHDPYSQPPPASHDAPPLSQETFRIATVTTRARSNLITVPIQDDSGSSSTSSSR
DPLPPGPGPAPPPHHHPGDYPGQPVVSHPHHMMAPPQQRYGPPPPPPPPINHPMQHPPQG
SGTPHMVYNQAGPPPPMSNAPPPITPPPGHIMGQMPPYMNHPPPGPPPQHGGPPVNAPPP
HHYNPNSMQQFPEDQGTLSPPFNQQGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPD
QSRYRPYYQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacctttggagacaatgacctgcaaggcacggacggctcggggagtcttggg
ggccctgatgtccgcagacgcatccccatcaaactcatctccaaaccaaccatcaggagc
aaacctgctccccggacacaaagacccatgggccggcagccctccaaaccccaggctggg
gatgaagagagttttagcttcaagcaagaggagaggttcgactgtggtaccaaggctggg
gatgtgtttgcaagtcaacggaggttcccccagcaaatgttttgggactttaagttgaat
ttgataggtgaaaaggatgacattccagcacacttttgtgataagtgtggtctgcccata
aggatctatggacgcatgattccatgcaaacatgtgttctgttatgagtgtgcgttgctc
cacgagaagaagggagacaagatgtgcccaggtatgcagctcttcagctgcacagacccg
gtccagcgcatcgaacagtgtctgcggggctccctctacatgtgcagcattgtgaagggc
tgcaagcgcacctacctttcccagcgtgacctgcaagctcacatcaaccaccgccacatg
agggcagccaaggctttggcaagccgccaggacgccctgcaccttcccccatccacagag
gtgcctgaccgcttccgtgtgcccccgcctcacctgcccaagacccaagggcacctcccg
ccccctctccaacacgggggtcatgacccctacagtcagccaccaccggcttcccatgat
gcacctcctctttcccaggagaccttccgcattgccaccgtaactacacgcgcacgcagc
aacctcatcactgtgccaatccaggatgactccggttcttcctccacctcttcctcccgt
gaccctctccctcctggcccgggccctgctccacccccacaccaccaccctggggactac
cctggtcagcctgtagtgtcccacccccaccacatgatggcgccaccgcaacagcgctat
ggccctccacctcctccccctccacccatcaaccaccccatgcagcacccgccccagggc
tctgggacaccccacatggtgtacaaccaggccggccctcccccgcctatgtccaacgca
ccccctcccattacccccccgccaggacacatcatgggtcagatgcccccctacatgaac
caccctcctccaggccccccacctcaacacggtggtcctccagtcaacgccccccctccc
caccactacaaccctaactccatgcagcagttccctgaggaccagggcacactcagtccc
ccttttaaccagcaagggggtctgagccctgggatgtggcctgcccctagagggcctcct
cctccaaggatgcagggccccccacctcagggccagatgcctggaccacatcaccccgat
cagtcccgctaccgcccttattatcagtaa
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