Salmo salar (Atlantic salmon): 106576329
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Entry
106576329 CDS
T04363
Name
(RefSeq) liprin-alpha-2-like
KO
K26226
liprin-alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106576329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106576329
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106576329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
MAGI_u1
Motif
Other DBs
NCBI-GeneID:
106576329
NCBI-ProteinID:
XP_014008920
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All DBs
Position
ssa17:complement(46111628..46340987)
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AA seq
1320 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSASDPDSHFEQLMVNMLDERDRLLDTLRETQESLGLSQ
QHLEDVIYDRDSLQRQLSSALPQEFAALTKELNVCRENLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTSANQEIVALREQNAHIQRKVASGDGSEDILEGTDASQKVHSKRLSNGS
MESAHEAGQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELDTARKDLIKTEEMST
KYQRDIKEVRREAMCQKEDMEERIVTLEKRYLSAQRESTSLHDISDKLENELANKEAFLR
QMEDKNRQLLERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRH
LEGQLEEKHQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNV
LIQDSEGYRKQYEDSIHEKTHLADEIDKLRSELDQFRLRTGSLTEPTLSRYGSHLDTSGE
LRFSLGSLAETQSDHYRSAKVIRRPRRGRMGLRRDESKAKSLGEHEWRSQQLGILGSHPF
ESEMSDMSDIDDDDRETMFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKES
TELRAEEIENRVASVSLEGLNLARMHHPGASITASATASSLASSSPPSGHSTPKLDHRST
TDMERMGIMTLPSDLRKHRRKIAATDDDGQDKATIKCETSPPPTPRTVRMTRTLPASSHN
EARGIAASLEAEASALSSVASSQDSINKQPKKKGIKSSIGRLFGKKEKTRLAQLHAHREA
IGQSQGVSDPDLGQDMAVGKLGTQAEKDRRLKKKSGHELLEEARRKGLPFAQWDGPTVVA
WLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLT
SPSAPPTSRTPSGNVWVTHEELETLAAPSSKTRSGESEEGSWAQTLAYGDMNHEWIGNEW
LPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDR
KELERRREHSQHEMRDVLVWSNERVIRWVQSIGLKDYANILLESGVHGALVALDDNFDHT
SLALLIQIPNQSTQARQILEREYNNLLALGTERRLDEYEDNDLRGPSWRRQFPPRDVHGI
SMMPGSAETLPAGFRVTTGSHSRRLPPEVLYEALDDSPDDMYLDWFQGQIYWSYTMWPAV
GLCAFTPPKTPRFLLSTLPYLLSSPTVFTRYLYCSVPLFRSALEANYKGGHLFVKVVSLL
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcggggctcc
cagagcagcgcctcggacccagactcccactttgagcagctgatggtcaacatgctggat
gagagagaccgcctgttggacacgctgagggagacccaggagagcctggggctgtcccag
cagcacctggaggacgttatctatgaccgggactcactgcagcgccagctcagctccgcc
ctgccacaggagtttgcagccctgaccaaggagctgaacgtgtgcagagagaaccttctg
gagaaggaggaggagatctccgagctcaaggccgagaggaataacaccaggttgcttctg
gagcatctggagtgcctggtgtccaggcatgagcggtcactacgaatgaccgtggtcaag
cggcaggcccagtctccctcaggcgtgtccagtgaggtggaggtcctcaaagcgctcaag
tccctgttcgagcaccacaaagccctagacgagaaggtgagggagagactgcgggtgtcg
ctagagagggtctcggcattggaggaggagctaacatcagccaaccaggagattgtggcc
ttacgggagcagaatgcccacatccagaggaaggtggcatcaggggatgggtcagaggac
atactggagggaactgatgccagccagaaggtacatagcaagcgcctgtccaacggctcc
atggagtcggcccatgaggcgggccaggtggtggagctgcaggacctgctggagaagcag
aactatgagctggcccagatgaaggagcgcatgtcttccctctcgtcccgcgtctccgag
gtggagcaggagctggacaccgcgcgcaaggacctcatcaagacagaggagatgagtacc
aagtaccagagggacatcaaagaggtgaggagagaggctatgtgtcagaaggaggacatg
gaagagaggatcgtcactctggagaagcggtacctcagcgcccagagagagtccacctct
ctgcacgacatcagcgacaaactggagaatgagctggccaataaggaagccttcctcaga
cagatggaggataagaacaggcagctgctggagcgtttggagctagcagagcagaagctg
cagcagaccatgagaaaggctgagaccctgccagaggtggaggctgaactggcccagagg
atagcagcactcaccaaggcggaggagcgccacggcagcatcgaggaacgcatgaggcac
ctggagggccagctggaggagaagcaccaggagctgctcagagctcggcagagagaaaag
atgaacgaggaacacaacaagcgcctgtcggacacggtggacagacttctcacagagtcc
aacgaacgtcttcagctccacctgaaagagaggatggctgctctggaagagaagaatgtt
ttaatacaagactcggaaggctacagaaaacagtacgaggattcaatccatgaaaaaact
catctggcagatgagatagacaagctgagatcagagttggaccagttccgactgagaaca
ggctcactcacagaacccactctgtcacggtatgggtctcacctggacacgtcgggggag
ctccgcttctccctgggctccctggctgagacccagtcagaccactaccggtcagccaag
gtcatccgcaggcccaggagaggacgcatgggtctccgcagggacgagagcaaggctaag
tcactgggggagcacgagtggcgctctcagcagctaggcatcctgggtagccaccccttt
gagagtgagatgtctgacatgtcggacattgatgacgatgaccgggagaccatgttcagc
tccatggacctgctgtcccccggcggtcactcagatgcccagaccctagccatgatgctg
caggagcagctggacgccattaacaaagagatacgactgatccaggaggagaaggagtcg
acagagctgcgggcggaggagatagagaaccgtgtggccagcgtcagcctggagggtctc
aacctcgcccgtatgcaccacccaggagcctccatcaccgcctcggccaccgcctcctcc
ctggcctcttcctccccgcccagcggacactccacccccaagctggaccaccgcagcacc
acagacatggagcgcatgggtatcatgacactgcccagtgatctgaggaaacacaggaga
aagattgcggccaccgatgatgacggccaggacaaggctaccatcaagtgtgagacgtcc
cctccccccacgccccggaccgtacgcatgacccgcacactgccagcctcctcacacaac
gaggcccgaggcattgctgccagcctggaggcagaggccagtgctctgagcagcgtagcc
agcagtcaggactccatcaacaagcagcccaagaagaagggcatcaagtcctccatcgga
cgcctgtttggcaagaaggagaagaccagactggcacagctgcatgcccacagggaggcc
atcgggcagagccaaggagtgtctgatccagacctgggtcaggacatggctgtggggaag
ctggggactcaggctgagaaagaccgccggctgaaaaagaaaagcgggcacgagctgttg
gaagaggcgaggaggaaaggcttacctttcgcccaatgggacggccccacagtggtggcc
tggctggagttgtggctggggatgcccgcctggtacgtggcggcatgtcgtgccaacgtg
aagagcggtgccatcatgtctgccctgtcagacacagagatccagagggagatcggcatc
agtaaccccctgcaccgcctcaaactacgcctggccatccaggagatggtctccctcacc
agtccatctgccccgccaacctccagaaccccgtcaggcaatgtatgggtgacccacgag
gaactggagaccctcgcagcaccctcctcgaaaacgaggtccggggagtccgaggagggg
agctgggcgcagactctagcgtatggtgacatgaaccatgagtggatagggaacgagtgg
ttgcccagtctaggactacctcagtaccgcagctacttcatggagtgcctggtggacgca
cgcatgctggaccacctcaccaagaaggacctccgggtgcatctcaaaatggtggacagc
tttcacaggacgagtttgcagtatggtatcatgggtctgaagaagctcaactatgacagg
aaggagctggagagacgcagagagcacagccagcatgaaatgagagacgtgctggtgtgg
agcaacgagcgggtgattcgctgggtccagagcatcggcctaaaggactatgccaacatc
ctgctggagagtggcgtgcacggggccctggtcgccctcgacgacaactttgaccacacc
agcctggcgctgctcatccagatccccaaccaaagcactcaggcacgtcagattctggag
agagaatataataacctgctagccctgggcactgagagacgactggacgagtatgaagat
aatgacctccgggggccatcgtggaggaggcagttccccccgcgggacgtccacgggatc
agtatgatgcccggctcggcagagaccctccccgctggcttccgcgtcaccaccggctca
cactcccgtaggctaccccccgaagtgctctatgaggcgctggatgatagtcctgacgac
atgtatttggactggtttcaaggtcagatatactggagctataccatgtggcctgctgtt
ggcctgtgtgcctttacgccccccaaaactccccggttcctgctgtccaccctaccgtac
ctcctctcttcaccaactgtcttcactcgctacctctactgctctgttcctctgtttcgt
tctgcccttgaagccaactacaagggtggccatttgtttgtcaaggttgtcagtttgtta
tag
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