Salmo salar (Atlantic salmon): 106576395
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Entry
106576395 CDS
T04363
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106576395
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
Other 90S particles
106576395
Pre-60S particles
Other pre-60S particles
106576395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106576395
NCBI-ProteinID:
XP_014009012
UniProt:
A0A1S3N0Q4
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All DBs
Position
ssa17:complement(48316892..48322557)
Genome browser
AA seq
493 aa
AA seq
DB search
MSSQITCIGWVKRGVSKETPDKVELSKEELQRIIAEAKEQLGERVGEEEEDDEGMASGQE
QSDEAEAVQGQEPEQDENEAGREEADELAEYGLDRYDEEDSVTANLGDSLAGLTVFSTNE
EDPYITIKDTDQYEREDFQIKPNDNLIISGKAEKDSCNLEIHVYNAEEESLYVHHDILLP
AYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKKKKS
KKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADKTVILWDLAQGKPATTLRRHTDKVQT
LMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLASTED
GFIYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPNLIH
TRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAKVFGNRERLVATTAPEA
SSSTSSTADMELS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaatcacttgtattggatgggtaaagcgaggcgtttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacgcattatagcagaggcaaaagaacaa
ttgggtgaacgcgtaggtgaagaggaggaggatgatgaaggcatggccagcgggcaggaa
cagagtgacgaggcagaagctgttcagggacaggagccagagcaagatgaaaatgaagca
ggaagggaggaagctgatgaactagcagagtatggtttggatagatatgacgaggaagac
tcggtgactgccaaccttggtgacagccttgccggcctcacagtgttcagcaccaatgag
gaggatccttacattaccatcaaagacacagaccagtatgagcgagaggactttcaaatc
aagcccaatgataacctcataatttcaggcaaagcagagaaggactcctgcaatctggag
attcacgtatacaacgccgaggaggaatccctctatgttcaccatgacatactcctgcca
gcctatccattgtgtgtggagtggcttaactttgaccctagtccagaaggcacaggcaat
tatgcggctgtaggcaacatgacaccgcagatcgacgtgtgggacctggatgtggtggac
tgcctagagcctgccttcaccctggggagcaagaaggcctccaagaagaaaaagaaaagc
aaaaaggctgcagcagagccagtggaaggtcatacagacgctgtactggacttatcctgg
aacaaactggtccgcaacgtcttggccagtgggtcagccgacaaaaccgtgatcctgtgg
gatctggcacagggaaagccagccacaacactgcgcagacacactgacaaggttcagacg
ttgatgttccacccctttgaagctcagaccctgatatcaggatcatatgataagtcggca
atcctgtatgactgccgcagcccggacagcagccatcgcacttggaggtttagcgggcag
gtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcgagcacagaggac
ggctttatttactgtctggacgcgcgctcggacaagccagtgtttacgctaagggcacat
gacggagaggtgtcaggcttggaccttagcagccagatccggggatgcttggtcacctcg
tcagcagacaaacacgtcaagatttgggacatcttggggaacaagcccaatctgattcac
acccgggacatgaaaatgggggtgctgttctgtgcagcatgctgtcctgacatgcccttt
gtatatgcctttggaggacagagggatggcctgcgggtttgggacataagtgatgtggca
gcagtcgctaaggtgtttggcaatcgggagcggttggtggcaaccacagcgcctgaggca
tccagcagcacttcctccacagcagatatggagctttcctag
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