Salmo salar (Atlantic salmon): 106576414
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Entry
106576414 CDS
T04363
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106576414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106576414
03021 Transcription machinery [BR:
sasa03021
]
106576414
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106576414
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
106576414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
POU2F1_C
HTH_31
Motif
Other DBs
NCBI-GeneID:
106576414
NCBI-ProteinID:
XP_014009048
UniProt:
A0A1S3N0N8
LinkDB
All DBs
Position
ssa02:complement(9833324..9924468)
Genome browser
AA seq
747 aa
AA seq
DB search
MFVPLPVPFMFQRTAPDLNAWRLKSPLALRSDSEIRMSKPVEVENTVADSPMESTDSERN
GPDSNHQLQQMKISPFHLSPTLSSNKNKMEECGEMSPGPPPHHSHAPSQTPLPHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSVQQSNAAHAAHAAHAAHAAHAAAQAN
QQAQAAAAANQHAQQQQAGQTGQQGQSQPQGQSTQEQTGQPVPVPPTHPQLTLSQPIQLT
AQDIQQLLQLQQLVLVPGHHLQSPQFLLQQHQGQQGLLSTPNLIQLPQQNQGSLLSAPTR
LGLQAQRDKAMEGSGVMTSVSSVTSHPEEPSDLEELEVFARTFKQRRIKLGFTQGDVGMA
MGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDSTMPSPSSLSSSS
MGFEGLPGRRRKKRTSIETNVRVALERAFITQNQKPTSEEILCIADQLSMEKEVIRVWFC
NRRQKEKRINPNSATPPLPSQPPQAPPTHKPPCYSPHMMSSQLSSQLSQAVTSLSTTLTT
MSSFSPLIPSGPTHSSLSSASSPVTPPPPRSTASPAPPSHSTLSLNTGLWRMGKKNGDVS
NYITDFAANLRNTVMGVNTGNQALNQALLSNNPLATIQALAASGGQLPLSSLEGGSKVLL
GGAGGQGGGLQSSFFLNHPAFLHMGQNPGAGLISAAVAKASQPSPFPSTSSISPTPCSPS
PCSSPASSCDFDELAHSPSSLGGAKIE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcatgtttcagagaactgcacctgacctcaacgcc
tggcgtctcaagtccccgttggctctacgttccgactccgaaatcaggatgtcaaagcca
gttgaggttgagaacacagtggctgactctccaatggagagcacagactcagagaggaat
ggtcctgactcaaatcatcagcttcagcagatgaaaatcagtccctttcacctttctcca
accctcagcagcaacaagaataagatggaagaatgtggtgagatgtccccgggccctcct
ccccaccacagccatgccccctcacagacgcccctcccacacacacagctcatgctgact
ggctcccaactggcagggttgacagctctcttgccggctcagcagcagttgttactgcag
caggctcaggctcagcttctagctgcagctgtgcagcagtctgttcagcagtccaacgca
gctcacgcagctcacgcagctcacgcagctcatgcagcccacgcagccgcccaagccaat
cagcaagctcaggcagccgcagcagccaatcaacatgcccagcagcagcaggcgggacag
acagggcagcagggccaatcacagccccagggacagagcacacaggaacagacaggtcaa
cctgtccctgtcccgcccactcatccccagctcaccctctctcagccaattcagctcacc
gcccaggacatccagcagttgttgcagctgcagcagttggttctggtaccaggacaccac
ctgcagtctcctcagttcctcctccaacagcaccaagggcagcaaggactgctatcaaca
ccaaatctgattcagctacctcagcaaaaccaagggagcctcctgtccgctcccaccagg
ctggggctccaagcacagagagacaaggctatggagggcagtggggtcatgacctctgtg
tcctctgtgacctctcaccccgaggagcccagtgacctggaggaactggaggtgttcgcc
cgcaccttcaaacagagacgcatcaaactgggctttacacagggtgacgtgggaatggcc
atggggaagctatatgggaatgatttcagccagaccaccatctctcgcttcgaggccctc
aacctgagctttaagaacatgtgtaaactcaaaccactactggagaagtggctcaatgat
gcagagaccatgtccacagacagtactatgccaagccccagctctctgtcctcttcctcg
atgggcttcgagggcctgccgggccgacgcaggaagaagagaaccagcatcgagactaac
gtccgcgtggccctggagagagccttcatcacgcagaaccagaagcctacctcagaggag
atcctgtgtatcgcggaccagctcagcatggagaaggaggtgatccgcgtgtggttctgc
aaccgccgccagaaagagaagcgtatcaaccccaacagtgccacccctcccttgcccagc
cagcccccccaagccccaccgacgcacaaacccccctgctacagcccacacatgatgtcc
agtcagctgtccagtcagctgtcccaggcagtgaccagcctcagcaccacattgaccacc
atgtcatcgttctcccctctgatccccagtggtcccacccactcatctctcagctccgcc
tcctctccagtgactcctcctcctcctcgcagcacagccagcccagcccctcccagccac
agcacactgagtctcaacacaggcttatggcgtatgggtaaaaagaatggtgacgtgtct
aactacatcaccgattttgctgcaaacttgaggaacactgtgatgggagtaaacacaggg
aaccaggctctgaaccaagctctcctcagcaacaaccctctggctactatacaagcccta
gcagccagtggtggccagctgcccctttccagtcttgaggggggcagtaaggtgttgctg
ggtggtgcaggggggcagggagggggtctccagtcctccttcttcctcaaccacccagct
ttcctccacatgggccaaaatcctggtgctggattgatcagcgctgccgtagccaaagca
tcccagccctcccctttcccctccaccagtagcataagccccaccccctgctccccctcc
ccttgctccagccccgcctcttcctgcgacttcgatgaattggcacacagcccatcctca
ttgggaggggctaagattgagtga
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