Salmo salar (Atlantic salmon): 106576507
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Entry
106576507 CDS
T04363
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106576507
Enzymes [BR:
sasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
106576507
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106576507
Prokaryotic type
106576507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
106576507
NCBI-ProteinID:
XP_014009198
UniProt:
A0A1S3N146
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Position
ssa17:complement(51442748..51448236)
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AA seq
950 aa
AA seq
DB search
MTMKEEAPSVPECYISEHEGFYGTIKNSTRDFVVTEIDIHGQMVTKPSVSDVPQSSNITE
ACPGAKSEGKTNIISPKHQHNLKEENCPPVVKDVDSEPGPGQNSDITSTASQDCFDLRMI
LGQVVCEELEQFTALLREVSSSPNDGVEKNLANQESSNGSEKKMANQELSLGSFPDKHQR
ANVHRAVRHNFPFLLTVTNQSEIRVKEDPAFKLLSGLVSEEEAEDFIRFIDTKMPNSVYT
FRGDDSKEHRTAVHHFLSRRFGKLVETKSFSDQQQKTTAITVRLREKGKPRKRTADESKD
EEVYTAFTLRKESQETLEAISYMAAVLGVLPSDFTYAGIKDKRAVTYQSMVVKKISPQRL
REKTSEFEKRGVVLSSVRSVSEPLHLGRLQGNHFDLVVRDLRPHQGHGTLMELDSLVQEA
VENVQVKGFVNYYGPQRFGTGQSVQSDCVGLALLKEEMVAAVRLFFTPEEGDDSQNVAKR
HFLQTDNAKEALSLMPMSKARERMMLRALHRYGTGPEGCTRAWLSLPHGMRVFYPHAYCS
RVWNEAAAHRLTTLGHRARQGDLVWKQRGEEGIEAGETSLPQIHVVTAAEEEEEVYSLGQ
VVLPMLGNSVKYPENPVGGWYQERLARDGLQSCRFRVTPLKLNLPGCYRPLLAIPHNLTY
RLEQGQRAGERQQECNGKSQASGAVPQHPGTDTPRPGGLERQRGGESAVLYPDTDTTRPV
GLERQRGGESAVLYPDTDTTRPGGLERQRGGESAVLYPDTDTTRPGGLERQRGGESAVLY
PDTDTTRPGGLERQRGGESAVLYPDTDTTRPGGLERQRGGESAVLYPDTDTTRPGGLERQ
RGGESAVLYPDTDTTRPGGLERQRGGESAVLYPDTDTTRPGGLERQRGGESAVLYPDTDT
TRPGGLERQRGGESTVLYPDTDTPSLTLNFDLDSSCYATVCLREVMKCDP
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaggaggaagcaccgagtgtccctgagtgttacatctcagaacatgaaggg
ttctatggaaccatcaagaactccaccagagactttgtagtcacagagatagacatccat
ggccagatggtcactaaacccagtgtatctgatgttcctcaatcatccaacattactgag
gcatgcccaggtgccaagtctgaaggaaagacaaatattattagcccaaaacatcaacac
aacctcaaagaagagaattgtcctccggttgtaaaggatgtggattcagaacctggaccc
ggtcagaatagtgacatcacatccaccgccagccaagactgttttgacctgagaatgata
ctgggtcaggttgtctgtgaagagctagagcagttcactgctttattgagagaggtgtca
tcaagtcccaatgatggcgttgagaagaatctggccaaccaagaatcatccaatggcagt
gagaagaagatggccaatcaagagttgtccctgggttcattcccagacaaacaccaaaga
gctaacgttcaccgtgctgtccgacacaactttcccttcctgttgacagtaaccaaccaa
tcagagatcagggttaaggaggaccctgcctttaagctcctatcaggtttggtctctgag
gaggaggctgaagactttatcaggttcatcgacaccaagatgcctaactctgtgtacacg
ttcaggggtgatgacagtaaggagcacaggacggcagtgcaccacttcctcagtagacgg
tttggtaaactggtggagaccaagagcttcagtgaccagcagcagaagactacagccatt
acggtgaggttgagagaaaaagggaaacccaggaagaggacggctgatgagagtaaagat
gaagaggtctatacagcgttcactctgaggaaggagagccaagagactctggaggctatc
agctacatggcagctgtcctgggggtgctgccctctgacttcacctacgctggcatcaag
gacaagagggccgtcacctaccagtccatggtggtgaagaagatctcaccacaacggctg
agagagaagaccagtgagtttgagaagaggggggtggtcctctcctccgtccgctccgtc
tctgagcctcttcatctgggtagactccaggggaaccactttgacctggtggtacgggat
ctgagaccacaccagggtcatggcacactgatggagctggactcactggtgcaggaggct
gtggagaacgtacaggtcaaggggtttgtgaactactatggacctcagaggtttgggact
ggacagagtgttcagtctgactgcgtcggactggccctgctcaaagaggaaatggtggca
gctgtccgtctgttcttcacaccagaagagggtgatgactctcagaacgttgccaagaga
cacttcctccagactgataatgccaaggaggccctgtctctgatgcccatgtccaaggcc
agagagaggatgatgctgagggccctacatcgctatgggacaggcccagagggctgcacc
cgtgcctggctcagcctgccacatgggatgagggtcttctacccccacgcatactgcagc
cgggtctggaacgaggcggctgcacacaggctgaccacgctgggccacagggccaggcag
ggagatctggtctggaagcagaggggagaggaggggatagaggcgggagaaaccagctta
cctcagattcatgttgttactgctgcagaggaggaggaggaagtctactcactaggacag
gtggttcttcccatgcttggcaacagtgtgaagtacccagagaaccctgtagggggctgg
taccaggagagactggcgagggacggactacagagctgtcgtttcagagtcactcctctc
aaactgaacctccctggctgctaccgtcccttactggccatcccacataacctgacctac
aggctggagcagggccagagagctggggagaggcagcaggagtgtaatggaaagtcacag
gctagtggagcggtaccacagcatcccggcacagacacacctagacctggaggtctggag
aggcagagaggaggggagtcagcggtgctgtaccctgacacagacacaactagacctgta
ggtctggagaggcagagaggaggggagtcagcggtgctgtaccctgacacagacacaact
agacctggaggtctggagaggcagagaggaggggagtcagcggtgctgtaccctgacaca
gacacaactagacctggaggtctggagaggcagagaggaggggagtcagcggtgctgtac
cctgacacagacacaactagacctggaggtctggagaggcagagaggaggggagtcagcg
gtgctgtaccctgacacagacacaactagacctggaggtctggagaggcagagaggaggg
gagtcagcggtgctgtaccctgacacagacacaactagacctggaggtctggagaggcag
agaggaggggagtcagcggtgctgtaccctgacacagacacaactaggcctggaggtctg
gagaggcagagaggaggggagtcagcggtgctgtaccctgacacagacacaactagacct
ggaggtctggagaggcagagaggaggggagtcagcggtgctgtaccctgacacagacaca
actagacctggaggtctggagaggcagagaggaggggagtcaacggtgctgtaccctgac
acagacacgcctagtttgacgttgaactttgacctggactcttcctgctacgccaccgtc
tgcctcagagaggtcatgaaatgtgacccttaa
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