Salmo salar (Atlantic salmon): 106576680
Help
Entry
106576680 CDS
T04363
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106576680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106576680
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
106576680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
106576680
NCBI-ProteinID:
XP_014009450
UniProt:
A0A1S3N2A2
LinkDB
All DBs
Position
ssa18:complement(13472708..13546801)
Genome browser
AA seq
1900 aa
AA seq
DB search
MVDKNIYIVQGEIITVVSAIKRNSRWNTHTPLDEEQDPLLNSFSHLKETLNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEVRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKIPSCILDTQDLICAEQPINTNQRGLER
LKMRAGGMSESSKWKKQKRLPRPPHHMVRSASGGLEQAPPATLSNNNLTGGVLFIEQVSL
SVPDSMASSMSSPTDSGLDTCSKATSREDLTDLDQSSSVATTPGTATSPSTEPGRLDAQS
EGRQVDRAQSASVESIPEVLEDRDSVTEQSDSASIHDMDYVNPRGVRFTPQQTQRDGEDG
AALIPYGLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQLLTVALEAAHIAPYQSLLGLV
KDELCRHLFQLLNVDRMNLCTASIRACFLLFESMRGHLKFQLEMYLKRLMDIITSENMKM
PYEMKEMALEALVQLWRIPSFVTELYINHDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTT
HLLSLEALLTVIDSTEAHCQAKVLNSTAQQDQSAEIMLAEREGSTNDRGDTTTEAGRQVN
SANGQNVPEADSVPLPPTSGHLMAEKMRLGRQDQEETEPSAEKKEPTKPQRFSSCLPDSQ
ELLDIRNKKKLLNSGTEQFNQKPKKGIQFLQEKGLLSSPMDNNEVAQWLRENPRLDKKQI
GEFISDRKHMELLDSFVNTFTFQGLRIDEALRLYLEAFRLPGEAPVIHRLLETFTDTWHK
VNGSPFMTNDAGFALAYAVIMLNTDQHNNNVRKQNIPMTVEQFKKNLKGVNGNTDFDQDM
LEDIYNAIKNDEIVMPDEQSGLVKENYVWSVLLHRGATSEGVFLHVPAGSYDHDLFTMTW
GPTIAALSYVFDKSLDDAIIQKAIAGFRKCAMISAHYGFSDVFDNLIISLCKFTTLSSES
AENLPTVFGSNGKAQVAAKTVFHLAHRHGDILREGWKNIMDSMLQLFRAELLPKAMVEVE
DFVEPNGKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGLRGPSTENQEAKQAAMLCI
KQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVMENRDRV
SCVWQTVRDHLCHLCVQATESCFLVERAVVGLIRLAIRLLRREDISSQVLLSLRLLLMMK
PHVLARVSREVAYGLHELLKTNAANIHCTDDWFTLFSLIECIGAGIKPPASFQVTSTSPD
IDTGAQSDSELSSHHHSEVSLDRGYTSDSEVYTEHGKSRMPRSVTDVDVASSGWLVVGKD
DLDINKVPASGSKPLLNPLVNQYSLTLGQDMGFHDTKSLIKCVESLSFIVRDAAHVTPEN
FELCVKAIRVFVEASLNGGYRTHEKKKNHKYDSQKSRVRRKPREKEGASRRAKASSQRPS
RSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAQEQRHLEVAGKKIE
ADSQTLWTSCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQTLDAVEWESCFNK
VLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFM
DKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSVDSRTGYSDLWEITWERINCFLPNL
REELFKQTVIPQPDPAPSPPVELAQPAAPSPPASPPPAQAPSPVPAAPTEPKTSSRPALP
QDPPPPSANGTDRSSPVPPSTPPMPTPVKMSPQISTPLSHSHMSQSPLILQPLASHLQVG
GVPPMSLPIILNPALIEASSPVPLLPAPRPTDLSDTPEVK
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaagaatatatacattgtccaaggggagattattactgttgtaagtgccatc
aagaggaattcaaggtggaatacccacactcctttggatgaagaacaagatccattgctt
aacagcttcagccacctgaaggagactctcaacaatataaaagagctgtcagatgtggag
cctaacgtattcctgcggcctttcctggaggtggtacgatctgaagacaccaccggacca
atcacaggcttggccctcacctctgtcaacaagttcctgtcctatggcctcatagatgct
aaccatgaggcggcagcagaggccattgagaacatggcagacgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtggtgctcatgaaaatcctacaggtcctg
aggaccttgctgctcacgcccgtcggtgcccacctgaccaacgagtctgtgtgcgagatc
atgcagtcgtgtttccgcatctgtttcgaggtgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtagacatggtgcagctgctgttctccagactaccccaatttaaa
gaggaggccaaaagttttgtgggtgctaacatgaagaagatcccatcctgtatcctggac
acacaggatcttatttgtgcagaacagcctataaacaccaatcagaggggcttagagagg
ctgaagatgcgtgctggtgggatgagcgagtcatcaaagtggaagaagcagaagcgcttg
ccccggcccccccatcacatggtacgaagcgcctcgggtggattggagcaggcccctccc
gccacccttagcaacaacaacctcactggtggtgtccttttcatcgagcaggttagtttg
tctgtcccagacagcatggcctcttccatgtctagccccacagacagcggcctggacact
tgctccaaggccacctccagagaggacctgacagacctggaccagagcagctctgtcgcc
accaccccaggcacagcaactagcccttccacagagcctggacgcctggatgctcagtct
gaggggaggcaggtggatcgtgcccagtcagcttcggtggagtccatccctgaggtcctg
gaggacagagactctgtgacggagcagtcagactcagcctcaatacacgacatggattac
gtcaacccccgaggagtccgcttcacaccacagcaaacacagagagacggtgaggatggt
gcggctctcatcccctacggtctgccctgtctgcgggagctcttccgcttcctcatctcg
ctgactaacccccatgaccgccacaacacggatgccatgatgcacatgggcctgcagctg
ctgactgtggctctggaagcagcccacattgccccctaccagtcactgctgggtctggtc
aaagacgagctctgcagacacctcttccagttgctcaatgtggaccgtatgaacctgtgc
accgcctccatccgagcatgcttcttgctctttgagagcatgcgaggacatttgaaattt
cagcttgagatgtatctgaagaggctgatggacatcatcacgtcagagaacatgaagatg
ccttatgagatgaaggagatggccctggaggccctggtgcagctctggaggatccccagc
ttcgtcaccgagctctacatcaaccacgactgtgacttctactgctcaaacctgtttgaa
gacctcaccaagctgctctccaagaatgccttccctgtgtccggacagctctacacaact
cacctcctctcactagaggccctactgactgttattgacagcacagaggcccactgccag
gctaaggtgctcaacagcacagctcagcaggaccaatcagcagaaattatgttggcggaa
cgtgagggctcaaccaatgaccgtggagacacaaccacagaagcaggcaggcaggtgaac
agtgccaatggtcagaatgttccagaggctgacagcgtgccccttccacctaccagcggg
cacctaatggcagagaagatgagactgggcagacaagaccaggaggagacagaaccatct
gctgagaagaaagaaccgacaaagcctcaacgcttctcgtcttgtttacctgattctcaa
gagctgttggacatcagaaataaaaagaagctgctgaacagcggtacagagcagttcaac
cagaagcctaagaaaggcatccagttcctgcaggagaagggtctcctcagcagccccatg
gacaacaacgaggtggcccagtggctccgggagaacccccgcctcgacaagaagcagatc
ggagagttcatcagtgaccgcaagcacatggagctactggacagcttcgtcaacacgttc
actttccaaggactgcgtattgacgaggcgctgcgtctgtatctcgaggccttcagactg
ccaggagaggctccggtcatccatcgacttttggaaaccttcacagacacctggcataaa
gtgaacggctctcccttcatgaccaacgacgcgggcttcgccctggcctacgctgtcatc
atgctcaacacggaccagcacaacaacaacgtgcgcaagcagaacatccccatgactgtt
gagcaattcaagaagaatctgaagggtgtgaatggaaatacagacttcgatcaggatatg
ctggaggacatctacaatgcaatcaagaatgacgagatcgtgatgccagacgagcagtca
ggcctggtgaaagagaattatgtgtggagcgtgttgctccaccggggggccacctccgag
ggggtcttcctccacgtgcccgccggcagctacgaccacgacctgttcaccatgacctgg
gggcccaccatcgccgccctctcctacgtcttcgacaagagcctggatgacgccatcatc
cagaaggccatcgctggcttccggaaatgtgccatgatatcagctcattatggattcagt
gacgtgtttgataatttgatcatctccctctgcaagtttacaacgctcagcagcgagtcg
gcggagaacctgcccacagtgtttgggagtaacgggaaggcccaggtagctgctaagacc
gtgttccacctggcccaccggcacggtgacatcctgagggagggctggaagaacatcatg
gactcaatgctgcagctgttcagagctgagctgctgcccaaggccatggtggaggtggag
gattttgttgagccaaatggaaagatttcacttcaaagagaagagacgccttcaaatcgg
ggcgagtctgcggtgctgagctttgtgaactggctgactctgagtggagcggagcagtct
ggtctacgtgggccctctactgagaaccaggaggccaagcaggcagcaatgctctgtatc
aagcaatgtgacccagagaagctgatcacagagagtaaattcctgcagctggagtctcta
caggagctgatgaaggctctgatctcagtcacacctgatgaggagacgtatgatgaggag
gacgcggctttctgcctggagatgctgctacgcatcgtcatggagaacagggaccgcgtg
tcatgtgtatggcagacggtgcgggaccacctgtgccacttgtgtgtccaggctacagag
agctgcttcttggtggagagggccgtggtgggcctcatcagactggctatccgcctgctg
cgcagagaggacatcagctcacaggtgctgctgtccctgcgtctcctgctgatgatgaaa
ccacacgtcctggcccgggttagccgggaggtggcctacggcctccatgagctgctcaag
accaacgctgccaacatccactgcacagacgactggttcaccctcttctccctaatcgag
tgcatcggggccgggatcaaaccgcccgcctccttccaggtcacctccaccagtcccgac
atcgacacaggtgcccagtcagacagtgagctgtcgtcccaccaccacagcgaggtgagt
ctggaccggggctacacctccgactctgaggtctacacggagcatggaaagtccaggatg
ccccgctctgtcactgacgtggacgtggccagcagcggatggctggtggttggtaaagat
gacctggacatcaacaaggtaccggcctctggctccaagcccctgctcaaccctctagtg
aaccagtacagcctgaccctgggccaagacatgggcttccacgacaccaagtccctcatc
aagtgtgtggagtccctctccttcatagtacgcgatgctgcacatgtcacccctgaaaac
tttgagctgtgtgtcaaggccatccgggtgtttgtggaggccagccttaacggaggctac
aggacccatgagaagaagaagaaccacaagtatgactcccagaagtcccgtgtgaggagg
aagcctcgggagaaagagggggcatcccgccgcgccaaggcctccagccagaggccctcc
cgttcccatagcgacgacgaggaggacgagggggtcccagccagctaccacacggtgtca
ttacaggttagtcaggacctgttagacctgatgcacacgctgcacacgagggccgccagc
atctacagctcctgggcacaggaacagcgccacttggaggtcgcagggaagaagattgag
gctgactcccagacactgtggaccagctgctggtgcccacttctccaagggatagcctgg
ctgtgctgtgatgccaggcggcaggtgcgaatgcaggccctgacctacctccagagggca
ctgttggttcatgacctgcagacactagatgctgtggagtgggagtcctgcttcaacaag
gtcctgttccccctgctgaccaagctgctggacaatattagccctgcagatgtgggaggc
atggaggagaccaggatgagggcctgcaccctgctgtcaaaggtgttcctgcagcacctc
tctcccctgttgtctctgcccacctttgctgccctgtggctcaccatcctggacttcatg
gacaagtacatgcacgctggctccagtgacctactgctggaagccattccagagtctctg
aagaacatgctgctggtgatggacacagcaggaatcttccacagcgttgactcccgtacg
ggatactctgacctgtgggagatcacctgggaacgcatcaactgcttcctgcctaacctc
cgggaagagctcttcaaacagacagtcataccccaaccagatcctgctcccagtccccca
gtggaacttgcccagccggctgccccctcccccccagcctcgccacccccagcccaggcc
ccatctccagtgccagctgcccccacagagccaaagacctccagcagaccagcgttgccc
caagatcccccaccacctagtgccaacggaactgacagatcatctccagtgcccccgtcg
actccccccatgcccaccccagtgaagatgtccccccagatctctacccccctgagtcac
tcccacatgagtcagtcccccctcatcctgcagcccctggcctcccatctgcaggtaggg
ggcgtgccccccatgtccctccccatcatcctcaaccccgccctcattgaggccagctca
cctgtccccctgctccctgcccctaggcccaccgaccttagtgacaccccggaggtaaaa
tag
DBGET
integrated database retrieval system
