Salmo salar (Atlantic salmon): 106576721
Help
Entry
106576721 CDS
T04363
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106576721 (vsx1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106576721 (vsx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106576721
NCBI-ProteinID:
XP_014009538
UniProt:
A0A1S3N224
LinkDB
All DBs
Position
ssa18:complement(11977369..11980092)
Genome browser
AA seq
348 aa
AA seq
DB search
MTTMTGRDDGSDEKPKVKMLAPSFGIDKSRLHGSGFRSKGFAITDLLGLETDLQPRQSGP
HGVGGNGDIQSNGMGFPFAGGSLPLGLGFLCSLAAQQPAGAPCFLPSHIPLLQSRTESHF
MQNLEQQRDPYSDDECLSGDRNDSKNSGNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYP
DVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLP
ESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKKSPGTPESTHSEETKGKDSDMSWPN
RASAVDDSEDMAIDLSSTSKQDSNNKSTLKSLSPQRDLIPNSDSDDES
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgacaggaagagatgatggctcggatgaaaagcccaaagtcaaaatgctg
gctccatcatttgggatcgataagtcacgacttcatggatctgggtttaggtctaaaggc
tttgccatcacggacctactgggtcttgaaacggatctccagcctcgccaatccggacct
catggagtaggaggaaacggggatattcagagcaatgggatgggattccctttcgctgga
ggatccttgcctcttggtctaggatttctgtgcagtttagcagctcagcaacctgcggga
gccccctgcttcctaccgagtcacatacccctccttcagtccaggaccgagagtcatttc
atgcagaacttggagcaacaaagagacccctactctgatgatgaatgtctctctggtgat
cgaaacgattcgaaaaactcagggaactcacagaagagaaagaaaaggaggcacagaacc
gtgttcacatcgcatcaactggaggagctcgaaaaggcattccatgaagcacattaccca
gacgtatatgccagggaaatgttagcaatgaagacagaattgcctgaggacagaatacag
gtatggttccagaatcgtcgggccaagtggaggaaacgtgagaagtgctggggacgcagc
agtgtgatggcagagtatgggctctacggtgccatggtccgccactccatccctctgcca
gaatcaatcatcaactccgccaagagcgggatgatgggctcctgtgctccctggcttcta
ggtgagccagcaggaatgcacaagaagtccatggagatagtaaagaaatcgccaggtacg
ccagagtctacccactcggaggaaactaaagggaaagacagcgacatgtcctggcccaac
cgcgctagtgctgtagacgacagtgaggacatggcaatagacctatccagcacttccaag
caggacagcaacaacaagagcactttgaaatcattgtcgccgcaaagggatctcattccc
aacagtgattcagacgatgagagctaa
DBGET
integrated database retrieval system
