Salmo salar (Atlantic salmon): 106576750
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Entry
106576750 CDS
T04363
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106576750
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106576750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_6
zf-Nse
zf-RING_10
DUF4130
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
106576750
NCBI-ProteinID:
XP_014009594
UniProt:
A0A1S3N2P6
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Position
ssa18:10672208..10701031
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AA seq
514 aa
AA seq
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MAATWTLEDDMSCPVCCDVFTDPVVLGCSHSFCRSCLDNYWNTQVIKKCPVCRLHSLTDA
PPSNLALRNIVETFARERSHNTTKQEETRKGEKESQGRRESGGRSGLVRDGDERCSLHGK
RLLLFCVEDQEALCAVCQTSRRHRSHQLCPVDEAAQELKEEVKASIIPLRRKLETFQKLK
EDCMKTAEHIKSQVKQTERKIRDEFVELHHFLRLEEVVRLSALSEEVEMKTVIMTEKIEH
LAKKMTSLTSNIREIEQNIEANDLQFLQAYKNNKARANCTLQDPEPVSGALIDVAQHLGN
LRFKIWEKMQEKVQYTPVTLDPNTAAPWLSLSDDLTSVCVSGEKSHIPNNPERCDTCVCV
LGADPFSSGSHCWEVEVAGKTRWDLGVLRESVRRKGVLSVNPVHGFWALSLRDGGQYSAC
TMPWTRLTLKRRPRRVRVCLDYDAGEVTFYDPTDMSLIYTFRDKFKEPLLPYLCPCVSDS
GRNAEPLKICPAKVSLVHDVGDCHVLTLVRGHFL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacctggaccctggaggatgacatgtcctgccctgtgtgctgcgatgttttc
actgaccctgtggtgctgggctgcagccacagcttctgcaggagctgcctggacaactac
tggaacactcaggtcatcaaaaagtgccccgtctgccgcctccattccctaaccgacgct
ccacccagtaacctggctctgaggaacatcgtggagacctttgcgagggagaggagccac
aataccaccaagcaggaggagacgagaaagggggagaaggagagccagggaaggagggag
tcaggagggaggagtgggttggtacgggatggggatgaaaggtgcagtctccatgggaag
aggttgttgttgttctgtgtggaggaccaggaggctctgtgtgcggtgtgtcagacctcc
aggagacacaggagccatcagctctgccctgtggatgaggctgctcaggaactcaaggag
gaagtgaaagcatctatcatccccctgaggaggaagttggagacattccaaaagttgaag
gaggattgcatgaaaacagcagaacacatcaagagccaggtcaagcaaacagaaagaaag
ataagagatgagtttgtggagctgcatcactttctgcgtctggaggaagttgtccggctg
tctgccctctctgaggaggtggagatgaagacagttataatgacagagaagattgaacac
ctggccaagaagatgacctccctgaccagcaacatcagagagatagaacagaatatagag
gcaaacgaccttcaatttctccaggcttacaagaacaacaaagcaagggccaactgtaca
ttgcaggatccagagcctgtatcgggggcattgatcgatgtggcccaacacctgggcaac
ctaaggttcaagatctgggagaagatgcaggagaaggtgcaatacaccccagtgactctg
gaccctaacaccgcggccccctggctctctctctcagacgacctgaccagtgtgtgcgtc
agtggagagaagtctcacatccccaacaacccagagcgctgtgacacgtgtgtttgcgtg
ctgggggccgaccccttcagttccggcagtcactgttgggaggtggaggtggcgggtaag
accagatgggacctgggggtcctgagagagagtgtgcgtaggaaaggggtcctgagtgtg
aaccctgtccacgggttctgggccctgtccctgagggacggcggccagtacagcgcctgc
accatgccctggacccgtctcactctgaagaggaggcccagaagggtcagagtgtgtctg
gactatgacgcgggagaggtgactttctatgaccccactgacatgtcactcatctataca
ttcagggacaagtttaaagagccattgctgccctacctctgtccctgtgtgagtgacagt
ggccgcaatgctgagccactaaagatatgccctgccaaagtgtcattggttcatgatgtt
ggtgattgtcatgtcctgacccttgtaagaggtcattttctatag
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