Salmo salar (Atlantic salmon): 106576794
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Entry
106576794 CDS
T04363
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106576794
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106576794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_2
HEAT_GCN1_C
TOR1L1_N
HEAT_GCN1
HEAT_EZ
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
106576794
NCBI-ProteinID:
XP_014009678
UniProt:
A0A1S3N2G8
LinkDB
All DBs
Position
ssa18:complement(7585700..7655700)
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AA seq
1857 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAIQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPSPKPKEELCADFSPEDSSSDRLSFYRFDISRLLKHGASLLGS
AGAEFEVQDDKSGEVDPKERLARQRKLLQRKLGLDMGAAIGMDTMELFNDEDLDTQYTCT
PSGPKAQGQGEGGSEPCSSSGNHVPMQAAEIIDSEFRPGMSNRQKNKAKRMAKLVAKQRS
RDMDPNERSNDSFEGEPEEKHRKTSNVVIEQPATEHKVLIDNVPENSSLLEETQEWPLES
FCDELCNDLFNPSWEIRHGAGTGLREILKSQGAGGGKLVGSTAEQMARHHQEWLEDVVIR
LLCVFALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTDSGVAMTVDILLKLLTEDQWEV
RHGGLLGIKYGLAVRQDLISALLPRVLPAITEGLQDLDDDVRAVAAAALIPVVDGLVQLL
PNKVPFIVNSLWDALLELDDLTASTNSIMTLLSSLLAYPQVRQCSMQQSLTVLVPRVWPF
LRHTISSVRRAALETLFTLLSKADQSCALWLNQVLQDMLRHIFQSCILESNQEILDLIQK
VWTELLRQAPQQYVVAASCPWMGAWLCLMMQASHIPIDINMLLEVKSRCKEKAGGKTRQG
ALVQVKETVQEYIAGAETVTEDPVTRDYVVTRARLMAAKLLGALCRCICDPQLNSSSQDI
RPAESLGQLLLFHLNSKSALQRIVVALVLCEWAAVQKVVSAMVQPRLLAILSEQLYYDEI
AIPFTRMQNECKQLIALLADAQIDVRDRLNCSVFTIDQANELVTTIFAESTVGLDMKSKQ
FHPLDSKRQQAQSTVGETSLEWQQLHLRVHMFTACAVVNLQALPDKLNPVVRPLMEAAKR
EENTLVQGYAASFIAKLLQQCATRQPCPNSKIVKNLCSAICMDPLLTPSSACPVPPTQTV
KAGMSEKECMHHMVNKTKGIITLYRHQRAAFVITSKRGPTPKTSKTPTTELPPGSTITTD
TDENKKPFLVQRRGAEFSLTTVARHFGQELTRSLPYLWEFVVGPLRAVVENNQGIDAKLQ
LERGDAAAQELVNSLQVLEVTAGAMAPELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVG
VLSKIATMETMHLFLERVLPWLGCIEDGTKQEGAIEAMACVMEQLDVDIVPYIVLLVVPV
LGRMSDPSDSVRFMATQCFATLIRLLPLEAGIPDPPTMSDDLIRQKARERHFMEQLLDSR
KLENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYL
RAQEYAKTKAADCTPLPSLVVCPPTLTGHWVDEVGKFCTDEYLNPLHYTGPPTERARLQH
QVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVIL
SGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEA
LHRQVLPFLLRRMKKDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVSVEDTISTA
SIHEEENPTLKATGHVFQALQYLRKLCNHPGLVLLPQHPEYKRITDQLAAQHSSLRDIQH
SPKLSALKQLLLDCGLGSSGSAEGTEAVVAPHRVLIFCQLKSMLDIVEHDLLKPQLPAVT
YLRLDGSVPTGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD
LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGTDQ
LLNLFTLDKDGKDDKGESSSSGGKASIKNVLDGLGDLWDQQQYETEYNLDSFMHSLH
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtcaaggcttgatcgtctgttcatcctacttgacactggaactacaccggtg
acgaggaaggctgctgccatacagctgggagatgtggtcaaactccacccgcatgagctc
aacaaccttttgtcgaaggtgttgacatacctgagaagtccaaactgggacacgcgtatc
gctgcgggtcaggcagtggaggccattgtgaagaatatcccagagtggaacccgtcaccc
aagcccaaagaagagttgtgtgcagacttctccccagaagactcctcctctgaccggttg
agtttctaccgctttgacatttcccgcctgctcaaacatggtgcttctctgctgggttcc
gccggtgcggagtttgaggtccaggatgacaagtctggtgaggtggaccctaaagagcgt
ctggcccgccagaggaagctgctgcagaggaagctgggactggacatgggtgccgccatc
ggcatggacacgatggaactgttcaacgacgaggacctggacacccagtacacctgcacg
ccgagtggccctaaggcccagggacagggagaggggggctctgaaccctgctccagctcc
ggcaatcacgtgcccatgcaggcggcagagataatagactcagagtttcgaccaggcatg
agcaaccgacagaagaacaaggctaagaggatggccaagctagtggcaaagcaacgatcc
agagacatggatcccaacgagagaagtaatgacagttttgagggggagcctgaggagaag
cacaggaaaactagtaacgtagtcatcgagcaaccggcaacggagcataaagtcttaatc
gataacgttccagaaaactccagtctcttggaagagacccaggagtggcccctggagagc
ttctgtgatgagctctgtaatgacctcttcaacccctcatgggagattcgtcacggagca
ggcacaggcctcagggagatcctcaagtctcaaggcgctggaggagggaagctggtggga
agcactgcagaacagatggcgcggcaccaccaggagtggctggaggatgtggtcatccgg
ctgctctgtgtctttgctctggaccgttttggagattttgtctctgatgaggtggtggct
ccggttagagagacctgtgcccagacactgggcgtggccttgcgccacatgactgacagt
ggtgttgccatgacagtagacatcctgctgaagctgctgacagaggaccagtgggaggtc
cggcacgggggtcttctgggcatcaagtatggcctggcagtccgacaggacctgatatcc
gctctgcttccacgggtgctccctgccatcacggaggggctgcaggacctagatgatgat
gtcagagcggtggcggccgcggccctcatccctgtggtggacgggttagtgcagctactc
cccaacaaggtcccattcatagtgaactccctgtgggacgctctcctggagctggatgat
ctgacagcctccaccaacagcatcatgaccctactgtcctctctgctcgcctaccctcaa
gtccgacagtgcagcatgcagcagtccctaacggtcctcgtccctcgggtctggccattc
cttagacacaccatatcatcagttagacgggccgcactagagacccttttcaccctacta
tccaaagctgaccagagctgtgcattatggctcaaccaggtcctgcaagacatgctccga
cacatcttccagtcgtgcatcctggagagcaatcaggagatcctggacctcatccaaaag
gtgtggaccgagctgctgcgccaggcccctcagcagtacgtagtagcagccagctgtccc
tggatgggcgcctggctctgtctgatgatgcaagcctctcatatccccatagacatcaac
atgctgctggaagtcaagtctcgctgcaaggagaaggctggtgggaagactcgccaggga
gccttggttcaagtgaaggagactgttcaggagtacatcgccggggcagaaaccgtgacc
gaggacccagtgacgcgggactatgtggtgacacgggctcgactcatggccgctaagctg
ttgggggccctgtgtcggtgtatttgcgacccgcagctcaattcatcctcccaggacatc
cggccggctgagtcgctgggccagctgctcctcttccatctcaactccaagtctgccctg
cagcgcatcgtcgtggcactggtcctctgtgagtgggccgccgtgcagaaggtggtgtca
gccatggtccagcctcgcctgttagccatcctgtcagagcagctgtactacgatgagatc
gccattcccttcacacgcatgcagaacgagtgtaagcagctcatcgccctgctggccgac
gctcagatcgacgtgcgcgaccgcctcaactgcagcgtgttcactatcgaccaggccaac
gaactggtgaccaccatcttcgcagagtccaccgtgggtctggatatgaagtccaaacag
tttcatccactggacagcaagcgtcagcaggcccagtccacggtgggcgagaccagtttg
gagtggcagcagctgcacctgcgcgtccacatgttcaccgcctgcgccgtggtcaacctg
caggcgttaccagacaagctgaacccagtggtgcgtccgctgatggaggcggctaagcgg
gaggagaacaccctggttcagggttacgccgcctccttcatcgccaagctgctgcagcag
tgtgctactaggcagccatgtcccaattccaagatcgtcaagaacctgtgttcggcgatc
tgcatggaccccctgctcacgccctcctcggcctgccccgtgccccccactcagactgtt
aaagctggcatgtcggagaaagaatgcatgcaccacatggtcaataagaccaagggcatc
atcaccctgtaccgccaccagagggcagcatttgtcatcaccagcaagaggggccccacc
cccaaaacctccaagacccccaccactgaactgccacccggcagcaccatcaccacagat
actgatgagaataaaaagccatttctcgttcagagaagaggtgccgagttctctctgaca
acggttgccaggcactttggccaggagctgacgaggtcactgccctacctgtgggagttt
gtggtgggacctttgagggccgtggtggagaacaaccaaggcatcgatgcgaagctccag
ttggagaggggggatgctgcagcccaggagctggtcaactctctgcaggtgctggaggtc
acggctggagccatggcccccgagctcaaacctctgttgttggagcacctgccccacctg
ttcacctgtctgcagcacccgtacacggccgtgcgtcacatggcggcgcgatgcgttggt
gtgctcagtaagatcgctaccatggagaccatgcacctgttcctggaacgtgtgctgccc
tggctggggtgcattgaggatggcactaagcaggagggggccatcgaggccatggcctgt
gtgatggagcagttggatgtggacatcgtgccatacattgtgctgctggtggtgccggtg
ctgggccgcatgagtgaccccagtgacagcgtccgtttcatggccacgcagtgcttcgcc
accctcatccgcctgctaccactggaggcaggtatcccggatcctcccaccatgtcagat
gatctgattcgccagaaggccagagagcgtcacttcatggaacagctgctggacagcagg
aagttggagaactacaagatccctgtgcccatcaaggctgagctccgcaagtatcagcag
gacggagtgaactggctgtccttcctgaataagtacaagctacatggtatcctgtgtgac
gacatgggcctgggcaagaccctgcagtccatctgcatccttgctggggaccactacctc
agggcacaggagtatgccaagaccaaggcagcagactgcacccccctgccttctctggtg
gtgtgcccccctaccctgacgggtcactgggtggacgaggtgggcaagttctgcaccgac
gagtacctgaacccgctgcactacacaggaccccccactgagcgagcacggttacagcac
caagtcaaaaagcacaacttagtagtagcctcctacgatgttgtacgaaacgacattgac
ttttttaggaatataaaattcaattactgtatcctcgacgagggccatgtgatcaagaac
gggaagaccaagctctctaaggccattaagcagttggcggccaacttccgagtcatccta
tcaggaacgcccatccagaataatgttctggagctgtggtcgctctttgacttcctcatg
cccggcttcctgggcacagagcgccagtttgctgcccgctatggcaagcccatcctggcc
agccgtgacgccaagagctcgtcacgcgagcaagaggccggggtgctggccatggaggcg
ctgcatcgccaggtgctgcccttcctcttgaggagaatgaagaaggacgtgctgcaggac
ctgccccccaagatcatccaggactactactgcaacctcagccctctacaggttcagctg
tatgaggactttgccaagtcccgggccaaggtcagtgtggaggacaccatctctacagcc
tccatccacgaagaggagaatcccacgttgaaggccacgggccacgtgttccaggctctg
cagtacttgcggaagctgtgtaaccacccaggcctggtactgctgccacagcacccggag
tacaagcgcatcacagaccagctggcagcacaacactccagcctccgagacatccagcac
tcgcccaaactctcagctctcaaacagttgttgttggactgtggtctgggcagcagcggc
tcagcggagggcacagaggcggtggtggccccgcacagagtgctgatcttctgtcagctg
aagagcatgctggacatcgtggagcacgacctgctcaagccccagctgcccgccgtcacc
tacctgcgactggacggcagcgtcccaactggcctgcgccactccatcgtctccaggttc
aacaacgacccctccatagacgtgctgctgctcaccacccacgtgggcggtctgggtctg
aacctgactggtgctgacacggtggtgtttgtggaacacgactggaaccctatgagagac
ctacaggccatggaccgcgcccacaggataggacagaaacgcgtggtgaacgtgtatcgt
ctgatcacgcgtggcaccctggaggagaagatcatgggcctgcagaagttcaagatgagc
atcgccaacaccgtcatcagccaggagaacgccagtctgcagagtatgggcaccgaccag
ctcctcaacctcttcaccttggacaaggatgggaaggatgataagggcgagtcgtcgtcc
tctggagggaaggcctccattaagaacgtgctggacggcctgggggacctgtgggaccag
cagcagtacgaaaccgaatacaacctggacagcttcatgcactcgctccactag
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integrated database retrieval system
